DRSC/TRiP Functional Genomics Resources

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Protein Alignment Paf-AHalpha and Pafah1b3

DIOPT Version :9

Sequence 1:NP_525089.2 Gene:Paf-AHalpha / 32529 FlyBaseID:FBgn0025809 Length:225 Species:Drosophila melanogaster
Sequence 2:NP_001344279.1 Gene:Pafah1b3 / 18476 MGIID:108414 Length:232 Species:Mus musculus


Alignment Length:215 Identity:98/215 - (45%)
Similarity:144/215 - (66%) Gaps:0/215 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NPCVLPTPLPDLDGDKRWHSIHRRFISDCREKDPDVIFLGDCIFETVQDTEAWNKYFAPLHCLNF 66
            ||...|||:.|:.||.||.|:|.||::|.::|:|:|:|:||.:.:.:...|.|.:.|:|||.|||
Mouse     7 NPASKPTPVQDVQGDGRWMSLHHRFVADSKDKEPEVVFIGDSLVQLMHQCEIWRELFSPLHALNF 71

  Fly    67 SIRDDCTEHVLWRIENGALDNVNPKIVVLHVGTNNVRNSAEEVAEGVLANVTKIRQKLPNAYIVL 131
            .|..|.|:|||||:|||.|:::.|||||:.|||||..::||:|..|:.|.|..:.:..|.|.:|:
Mouse    72 GIGGDSTQHVLWRLENGELEHIRPKIVVVWVGTNNHSHTAEQVTGGIKAIVQLVNKLQPQARVVV 136

  Fly   132 PSLLPRGQQPNKLREKNAKINEVVNGLTKGLYRVQTVAIDKGLVQTDGSISHHDMFDYKNLTNAG 196
            ..||||||.||.|||||.::||:|.....|..|...:..|.|.|.:||:||||||:||.:|:..|
Mouse   137 LGLLPRGQHPNPLREKNRQVNELVRAALAGYPRAHFLDADPGFVHSDGTISHHDMYDYLHLSRLG 201

  Fly   197 AKKILEPLYDLLSQILNENE 216
            ...:...|:.||.::|.:::
Mouse   202 YTPVCRALHSLLLRLLAQDQ 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Paf-AHalphaNP_525089.2 PAF_acetylesterase_like 3..212 CDD:238858 96/208 (46%)
Pafah1b3NP_001344279.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20 6/12 (50%)
PAF_acetylesterase_like 8..206 CDD:238858 93/197 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167845422
Domainoid 1 1.000 145 1.000 Domainoid score I4555
eggNOG 1 0.900 - - E1_KOG1388
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 230 1.000 Inparanoid score I3436
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48396
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004246
OrthoInspector 1 1.000 - - otm43043
orthoMCL 1 0.900 - - OOG6_104898
Panther 1 1.100 - - O PTHR11852
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2985
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.760

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