DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Paf-AHalpha and pafah1b2

DIOPT Version :9

Sequence 1:NP_525089.2 Gene:Paf-AHalpha / 32529 FlyBaseID:FBgn0025809 Length:225 Species:Drosophila melanogaster
Sequence 2:XP_004916134.1 Gene:pafah1b2 / 100492775 XenbaseID:XB-GENE-962580 Length:259 Species:Xenopus tropicalis


Alignment Length:221 Identity:107/221 - (48%)
Similarity:148/221 - (66%) Gaps:0/221 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NPCVLPTPLPDLDGDKRWHSIHRRFISDCREKDPDVIFLGDCIFETVQDTEAWNKYFAPLHCLNF 66
            |...:|....||.||.||.|.|.||:.||::|:|||:|:||.:.:.:|..|.|.:.|:|||.|||
 Frog    37 NSAAVPLAAEDLQGDDRWLSQHNRFVLDCKDKEPDVLFVGDSLVQLMQQYEIWRELFSPLHALNF 101

  Fly    67 SIRDDCTEHVLWRIENGALDNVNPKIVVLHVGTNNVRNSAEEVAEGVLANVTKIRQKLPNAYIVL 131
            .|..|.|.|||||::||.|:|:.||::||.:||||..|||||||.||.|.:..|....|.|.|::
 Frog   102 GIGGDTTRHVLWRLQNGELENIKPKVIVLWIGTNNHENSAEEVAGGVEAIINVINILQPQAKIIV 166

  Fly   132 PSLLPRGQQPNKLREKNAKINEVVNGLTKGLYRVQTVAIDKGLVQTDGSISHHDMFDYKNLTNAG 196
            .:|||||::||.||||||::|.::......|..||.:.:|.|.|.:||:||.|||||:.:||.||
 Frog   167 MALLPRGEKPNPLREKNARVNHILRSWLPRLPGVQLLDVDNGFVHSDGTISRHDMFDFLHLTAAG 231

  Fly   197 AKKILEPLYDLLSQILNENEPENDLT 222
            ..|:..||::|:.|:|.|...|..:|
 Frog   232 YAKVCRPLHELIMQLLEETPEEKQVT 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Paf-AHalphaNP_525089.2 PAF_acetylesterase_like 3..212 CDD:238858 102/208 (49%)
pafah1b2XP_004916134.1 PAF_acetylesterase_like 39..247 CDD:238858 102/207 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 147 1.000 Domainoid score I4470
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1932
Inparanoid 1 1.050 231 1.000 Inparanoid score I3357
OMA 1 1.010 - - QHG48396
OrthoDB 1 1.010 - - D1604899at2759
OrthoFinder 1 1.000 - - FOG0004246
OrthoInspector 1 1.000 - - otm48167
Panther 1 1.100 - - LDO PTHR11852
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4710
SonicParanoid 1 1.000 - - X2985
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

Return to query results.
Submit another query.