DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gspt1l and eEF1alpha1

DIOPT Version :9

Sequence 1:NP_942101.1 Gene:gspt1l / 325284 ZFINID:ZDB-GENE-030131-4009 Length:577 Species:Danio rerio
Sequence 2:NP_001286321.1 Gene:eEF1alpha1 / 36271 FlyBaseID:FBgn0284245 Length:463 Species:Drosophila melanogaster


Alignment Length:444 Identity:177/444 - (39%)
Similarity:267/444 - (60%) Gaps:17/444 - (3%)


- Green bases have known domain annotations that are detailed below.


Zfish   149 KKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERD 213
            :|.|:|:|.|||||:||||..|.::|..|.:||||:||:|:||:|..:.::..:|.||..:.||:
  Fly     4 EKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68

Zfish   214 KGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQT 278
            :|.|:::....|||.|.:.||:|||||:.|:.|||.|.||||.|||:::|..||||.|..|.|||
  Fly    69 RGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 133

Zfish   279 REHAMLAKTAGVKHLIVLVNKMDDPTVNWSLERYEECKEKLVPFLKKVGFNPRKDVHFMPCSGLN 343
            ||||:||.|.|||.|||.|||||.....:|..||||.|:::..::||:|:||.. |.|:|.||.:
  Fly   134 REHALLAFTLGVKQLIVGVNKMDSSEPPYSEARYEEIKKEVSSYIKKIGYNPAA-VAFVPISGWH 197

Zfish   344 GANLKEPAENCPWY------------TGLPFIPHLDSLPNFNRSSDGPVRLPIVDKYK--DMGTV 394
            |.|:.||:.|.||:            .|...|..||::....|.:|..:|||:.|.||  .:|||
  Fly   198 GDNMLEPSTNMPWFKGWKVERKEGNADGKTLIDALDAILPPARPTDKALRLPLQDVYKIGGIGTV 262

Zfish   395 ILGKLESGSIGKAQQLVMMPNRHTVEVLSLLSDEVETDEAGPGENLKLRLKGIEEEEILPGFILC 459
            .:|::|:|.:.....:|..|...|.||.|:........||.||:|:...:|.:..:|:..|::..
  Fly   263 PVGRVETGVLKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAG 327

Zfish   460 NAE-NLCHTGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVQITALICLVDKKTGDKSKTRPR 523
            ::: |.......|.||::::.|...|..||..||..||.....:...:...||:::|..::..|:
  Fly   328 DSKANPPKGAADFTAQVIVLNHPGQIANGYTPVLDCHTAHIACKFAEIKEKVDRRSGKTTEENPK 392

Zfish   524 FVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVAEKD 577
            |:|.....|..|..:..:|:|.|::||.:|||.:||..:|:|:| |:|.|..||
  Fly   393 FIKSGDAAIVNLVPSKPLCVEAFQEFPPLGRFAVRDMRQTVAVG-VIKAVNFKD 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gspt1lNP_942101.1 TEF1 150..572 CDD:227581 173/436 (40%)
EF1_alpha 154..370 CDD:206670 109/227 (48%)
eRF3_II 379..460 CDD:293906 26/82 (32%)
eRF3_C_III 466..572 CDD:294003 33/105 (31%)
eEF1alpha1NP_001286321.1 PTZ00141 1..457 CDD:185474 177/444 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1150082at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X149
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

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