DRSC/TRiP Functional Genomics Resources

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Protein Alignment Efhc1.1 and efhc1

DIOPT Version :10

Sequence 1:NP_573075.1 Gene:Efhc1.1 / 32528 FlyBaseID:FBgn0030691 Length:793 Species:Drosophila melanogaster
Sequence 2:NP_001008106.1 Gene:efhc1 / 493468 XenbaseID:XB-GENE-1011237 Length:544 Species:Xenopus tropicalis


Alignment Length:563 Identity:194/563 - (34%)
Similarity:293/563 - (52%) Gaps:65/563 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IPGMPLLPGTLFRDVSKGHYPKPQSLANVQGLSMLSDRQQPAPVESGSVTVDISCPPVGASSI-- 66
            :.|:|.|||..:||.:|..:.:.|:|....|.|        .|:   ..||.|...|:.|:.:  
 Frog     6 VHGLPFLPGNTYRDPTKSAFHRSQTLTYKNGYS--------RPI---LPTVGIGREPITANQLSQ 59

  Fly    67 ------------------YPPRSGPRMPPWLAYDKKVLCFHAYFKQTLQEVYHAPYLVRKVKIYY 113
                              .|......:|.::|:|||||.|..||::|:.......|.||:|.:||
 Frog    60 AELDELANKRPTLTYGRAKPAPPSDFIPSYVAFDKKVLRFEGYFQETVPLSPEEHYRVRRVTLYY 124

  Fly   114 YLEDGTLEIYEPRVDNSGIVQGCVVHRQRVQKAPPCDNEFMSLIDLNVDQTVQIFDRQYHITDCD 178
            ||||.|:.:.||.::||||.||..:.|||..|....|.....  ||||...|.::.|.:.:..||
 Frog   125 YLEDDTISVIEPPMENSGIPQGTFIKRQRHPKNANGDPYHWK--DLNVGINVTLYGRTFRLISCD 187

  Fly   179 PFTRTFLNKRGITVPDPVKSPCDPTEEQRKRENQPRSGNLIPKN-HPFAQFLKYDRQILKFQAYW 242
            .||:.||...||.:..|...|.||..|.|:|.|:.   .:.|.: ....|:|..||::|:|.|.|
 Frog   188 SFTQEFLESEGIELNPPEGIPTDPFTELRRRPNRT---FVTPSDFDKLKQYLTMDRKVLRFFAVW 249

  Fly   243 DDRTE--FGDVRKLELCYYLSDDTIEIKEQHIRNSGRDGPTVFLKRGRLAREFEGLQLPGQMTPM 305
            || ||  ||:...:.:.|||||||:||:|.|.||.|||...|.:||..|.:              
 Frog   250 DD-TESMFGEKHPVLIHYYLSDDTVEIREVHERNDGRDPFPVLMKRQHLPK-------------- 299

  Fly   306 TLLNVLGTNMRNVRYCVDPLNTGNKEI-HYYREKDLQIGSVINVYGRAVVITELDPFTQNYYRQR 369
                |:.........||  |...::|: .::...|.::|..|::.||...|.:.|.:|:::||.:
 Frog   300 ----VVNDTKDTFPMCV--LEISDQEVKEWFSPGDFKVGKHISILGRKFFIYDCDAYTRDFYRDK 358

  Fly   370 YGIQDFTPLPIPARSDDCADHRSERQLPPYNGWGSYEDSVGNCISVEPKPPKSDFKKFIKYDRYV 434
            .||.|..|:.:....:| .:.:..:::|||||:|..|||:.||:|:.|||||.|..|.::.|..|
 Frog   359 MGIGDLQPVEVNKERED-EEEKVIQEIPPYNGFGLLEDSLQNCLSLVPKPPKKDVLKMLENDHNV 422

  Fly   435 LRFGAKMLSTIKANCERIFVISYYLCDDTLQIQEIAVRNSGFLGGEFMKRTRLELPGQERFSCKQ 499
            ||:...:.|....:..|.||:||:|.:|.|.|.|..|||||.:||:|::::|:.:||.   :...
 Frog   423 LRYVVILDSPNPEDKVRRFVLSYFLANDMLSIFERQVRNSGIIGGKFLEKSRVLVPGS---TVDN 484

  Fly   500 PQYYMPWNFFVGSTMSLKDFIFHIVSADEYTLMYMEHHPEIFP 542
            |.||.|.:|.:|:.:.:.:..|.|..||||.|.||:.|.:.||
 Frog   485 PIYYGPKDFTIGAAIEVFNHRFIITDADEYVLNYMKAHSKEFP 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Efhc1.1NP_573075.1 DM10 82..189 CDD:128921 45/106 (42%)
DM10 232..370 CDD:128921 47/140 (34%)
DM10_dom 424..530 CDD:461948 38/105 (36%)
efhc1NP_001008106.1 DM10_dom 86..190 CDD:461948 43/105 (41%)
DM10_dom 232..351 CDD:461948 46/139 (33%)
DM10_dom 414..515 CDD:461948 38/103 (37%)

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