DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Efhc1.1 and EFHC1

DIOPT Version :9

Sequence 1:NP_573075.1 Gene:Efhc1.1 / 32528 FlyBaseID:FBgn0030691 Length:793 Species:Drosophila melanogaster
Sequence 2:NP_060570.2 Gene:EFHC1 / 114327 HGNCID:16406 Length:640 Species:Homo sapiens


Alignment Length:615 Identity:207/615 - (33%)
Similarity:316/615 - (51%) Gaps:62/615 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IPGMPLLPGTLFRDVSKGHYPKPQSLANVQGLSML--------SDRQQPAPVESGSVTVDISCPP 60
            :.|:|.||||.|:|.:|..:.:.|:|:...|.:::        .||.|...:....:....|..|
Human     6 VHGLPFLPGTSFKDSTKTAFHRSQTLSYRNGYAIVRRPTVGIGGDRLQFNQLSQAELDELASKAP 70

  Fly    61 V---GASSIYPPRSGPRMPPWLAYDKKVLCFHAYFKQTLQEVYHAPYLVRKVKIYYYLEDGTLEI 122
            |   |.....||  ...:|..:|:|||||.|.|||::.:.......|.:|:|.|||||||.::.:
Human    71 VLTYGQPKQAPP--ADFIPAHVAFDKKVLKFDAYFQEDVPMSTEEQYRIRQVNIYYYLEDDSMSV 133

  Fly   123 YEPRVDNSGIVQGCVVHRQRVQKAPPCDNEFMSLIDLNVDQTVQIFDRQYHITDCDPFTRTFLNK 187
            .||.|:||||:||.::.|||:.|....|:....  |||....:.|:.:.:.:.|||.||:.||..
Human   134 IEPVVENSGILQGKLIKRQRLAKNDRGDHYHWK--DLNRGINITIYGKTFRVVDCDQFTQVFLES 196

  Fly   188 RGITVPDPVKSPCDPTEEQRKRENQPRSGNLIPKN-HPFAQFLKYDRQILKFQAYWDDR-TEFGD 250
            :||.:..|.|...||..|.||   ||....:.|.: ....|||.:|:|:|:|.|.|||. :.:|:
Human   197 QGIELNPPEKMALDPYTELRK---QPLRKYVTPSDFDQLKQFLTFDKQVLRFYAIWDDTDSMYGE 258

  Fly   251 VRKLELCYYLSDDTIEIKEQHIRNSGRDGPTVFLKRGRLAREFEGLQLPGQMTPMTLLNVLGTNM 315
            .|...:.|||.|||:||:|.|.||.|||...:.:.|.|:.:                  ||..|.
Human   259 CRTYIIHYYLMDDTVEIREVHERNDGRDPFPLLMNRQRVPK------------------VLVENA 305

  Fly   316 RNVRYCVDPLNTGNKEI-HYYREKDLQIGSVINVYGRAVVITELDPFTQNYYRQRYGIQDFTPLP 379
            :|...||  |...::|: .:|..||..:|..:.:.||...|.:.||||:.||::::||.|...:.
Human   306 KNFPQCV--LEISDQEVLEWYTAKDFIVGKSLTILGRTFFIYDCDPFTRRYYKEKFGITDLPRID 368

  Fly   380 IPARSDDCADHRSERQLPPYNGWGSYEDSVGNCISVEPKPPKSDFKKFIKYDRYVLRFGAKMLST 444
            :..|.....    :::||||||:|..|||..||.::.||.||.|..|.:..|..|||:.|.:.|.
Human   369 VSKREPPPV----KQELPPYNGFGLVEDSAQNCFALIPKAPKKDVIKMLVNDNKVLRYLAVLESP 429

  Fly   445 IKANCERIFVISYYLCDDTLQIQEIAVRNSGFLGGEFMKRTRLELPGQERFSCKQPQYYMPWNFF 509
            |..:.:|.||.||:|..|.:.|.|..|||||.:||:::.||::..|..   :...|.||.|.:||
Human   430 IPEDKDRRFVFSYFLATDMISIFEPPVRNSGIIGGKYLGRTKVVKPYS---TVDNPVYYGPSDFF 491

  Fly   510 VGSTMSLKDFIFHIVSADEYTLMYMEHHPEIFPHANVGVIMEKVKSALQNRMAEFVGSCVPDCTD 574
            :|:.:.:....|.|:..|||.|.|||        :|......:..:::||.:.:.... .|:...
Human   492 IGAVIEVFGHRFIILDTDEYVLKYME--------SNAAQYSPEALASIQNHVRKREAP-APEAES 547

  Fly   575 LEKKRDVFV-SFESFKGALISIMGNQISDH 603
            .:.::|..| ..|    |||..:..|:.||
Human   548 KQTEKDPGVQELE----ALIDTIQKQLKDH 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Efhc1.1NP_573075.1 DM10 82..189 CDD:128921 44/106 (42%)
DUF1126 110..142 CDD:284078 17/31 (55%)
DM10 232..370 CDD:128921 48/139 (35%)
DUF1126 256..288 CDD:284078 16/31 (52%)
DM10 431..538 CDD:128921 42/106 (40%)
DUF1126 454..486 CDD:284078 15/31 (48%)
EFHC1NP_060570.2 Required for its localization in the mitotic spindle and interaction with alpha-tubulin. /evidence=ECO:0000269|PubMed:19734894 1..45 12/38 (32%)
DM10 93..198 CDD:128921 44/106 (42%)
DUF1126 122..153 CDD:284078 17/30 (57%)
DM10 239..359 CDD:128921 48/139 (35%)
DUF1126 263..296 CDD:284078 16/32 (50%)
DM10 416..520 CDD:128921 42/114 (37%)
DUF1126 439..471 CDD:284078 15/31 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 535..554 1/19 (5%)
EFh 579..639 CDD:238008
EF-hand_7 579..638 CDD:290234
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 82 1.000 Domainoid score I8413
eggNOG 1 0.900 - - E1_KOG0043
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG56477
OrthoDB 1 1.010 - - D126718at33208
OrthoFinder 1 1.000 - - FOG0002682
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101134
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
87.730

Return to query results.
Submit another query.