DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8952 and Tmprss11d

DIOPT Version :10

Sequence 1:NP_573072.1 Gene:CG8952 / 32525 FlyBaseID:FBgn0030688 Length:276 Species:Drosophila melanogaster
Sequence 2:NP_001028824.2 Gene:Tmprss11d / 64565 RGDID:620654 Length:417 Species:Rattus norvegicus


Alignment Length:260 Identity:84/260 - (32%)
Similarity:126/260 - (48%) Gaps:45/260 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 DNRIVSGSDAKLGQFPWQVILKRDAWDDLLCGGSIISDTWVLTAAHC------------TNGLSS 87
            :.||:.|:.|:.|.:||||.|:.:....  |||::||:.||||||||            |.|:|:
  Rat   183 EERIIGGTQAETGDWPWQVSLQLNNVHH--CGGTLISNLWVLTAAHCFRSYSNPQQWTATFGVST 245

  Fly    88 IFLMFGTVDLFNANALNMTSNNIIIHPDYND-KLNNDVSLIQLPEPLTFSANIQAIQLVGQYGDS 151
            |           :..|.:....|:.|.:||. ..:||::::||..|:||:.||..:.|.....:.
  Rat   246 I-----------SPRLRVRVRAILAHAEYNSITRDNDIAVVQLDRPVTFTRNIHRVCLPAATQNI 299

  Fly   152 IDYVGSVATIAGFGYTEDEYLDYS----ETLLYAQVEIIDNADC--VAIYGKYVVVDSTMCAKGF 210
            |.  .|||.:.|:|     .|.|.    ..|...:|.|:.:..|  .|.||. .|:...:|| |.
  Rat   300 IP--DSVAYVTGWG-----SLTYGGNTVTNLQQGEVRIVSSEVCNEPAGYGG-SVLPGMLCA-GV 355

  Fly   211 DGSDMSTCTGDSGGPLILYNKTIQQWQQIGINSFVAEDQCTY-RLPSGYARVSSFLGFIADKTGI 274
            ....:..|.|||||||: ...|.:.|..:||.|:  ..||.. ..|..|.||:::..:|..:|||
  Rat   356 RSGAVDACQGDSGGPLV-QEDTRRLWFVVGIVSW--GYQCGLPNKPGVYTRVTAYRNWIRQQTGI 417

  Fly   275  274
              Rat   418  417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8952NP_573072.1 Tryp_SPc 37..268 CDD:214473 80/250 (32%)
Tmprss11dNP_001028824.2 SEA 48..140 CDD:460188
Tryp_SPc 186..414 CDD:238113 80/252 (32%)
Blue background indicates that the domain is not in the aligned region.

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