DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8952 and modSP

DIOPT Version :10

Sequence 1:NP_573072.1 Gene:CG8952 / 32525 FlyBaseID:FBgn0030688 Length:276 Species:Drosophila melanogaster
Sequence 2:NP_536776.2 Gene:modSP / 42032 FlyBaseID:FBgn0051217 Length:628 Species:Drosophila melanogaster


Alignment Length:277 Identity:63/277 - (22%)
Similarity:86/277 - (31%) Gaps:86/277 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 SSPIK--------IDNRIVSGSDAKLGQFPWQVILKRDAWDD-----LLCGGSIISDTWVLTAAH 80
            ::|||        |:|.:|          ||.|.|.  .|.:     ..||||:::...|:||||
  Fly   362 ATPIKQFSSGGYTINNTVV----------PWHVGLY--VWHNEKDYHFQCGGSLLTPDLVITAAH 414

  Fly    81 CT--NGLSSIFLMFGTVDLFNANALNMTSNN--------------IIIHPDYNDKLNN---DVSL 126
            |.  .|....:    :.|.|...|.....|.              |.|.|.|..:..|   |::|
  Fly   415 CVYDEGTRLPY----SYDTFRVIAAKFYRNYGETTPEEKRRDVRLIEIAPGYKGRTENYYQDLAL 475

  Fly   127 IQLPEPLTFSANIQAIQLVGQYGDSIDYVGSVATIAGFGYTEDEYLDYSETLLYAQVEIIDNADC 191
            :.|.||...|..|:.|               ..|.|.|...|....|.........:|.......
  Fly   476 LTLDEPFELSHVIRPI---------------CVTFASFAEKESVTDDVQGKFAGWNIENKHELQF 525

  Fly   192 VAIYGKYVVVDSTMCAKG-----------FDGSDMSTCTGDSGGPLI--LYNKTIQQWQQ----- 238
            |....|    .:::|.:.           |.......|.|||||...  |.......|..     
  Fly   526 VPAVSK----SNSVCRRNLRDIQADKFCIFTQGKSLACQGDSGGGFTSELPTNAFSTWNTARHFL 586

  Fly   239 IGINSFVAE-DQCTYRL 254
            .|:.|.... |||.:.|
  Fly   587 FGVISNAPNADQCAHSL 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8952NP_573072.1 Tryp_SPc 37..268 CDD:214473 58/261 (22%)
modSPNP_536776.2 LDLa 27..58 CDD:197566
LDLa 70..101 CDD:197566
LDLa 123..157 CDD:197566
LDLa 167..199 CDD:238060
CCP <251..284 CDD:153056
Tryp_SPc 371..616 CDD:214473 60/268 (22%)
Blue background indicates that the domain is not in the aligned region.

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