DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8952 and ctrb1

DIOPT Version :9

Sequence 1:NP_573072.1 Gene:CG8952 / 32525 FlyBaseID:FBgn0030688 Length:276 Species:Drosophila melanogaster
Sequence 2:XP_002944677.2 Gene:ctrb1 / 394984 XenbaseID:XB-GENE-977509 Length:263 Species:Xenopus tropicalis


Alignment Length:262 Identity:84/262 - (32%)
Similarity:129/262 - (49%) Gaps:31/262 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LVLLAAISVVGQPFDPANSSPIKID-NRIVSGSDAKLGQFPWQVILK-RDAWDDLLCGGSIISDT 73
            |.|...:...|||    ..:|:... .|||:|.:|..|.:||||.|: ..:|.  .||||:|::.
 Frog    10 LALATTVYGCGQP----QIAPVVTGYARIVNGEEAVPGSWPWQVSLQDSTSWH--FCGGSLINNE 68

  Fly    74 WVLTAAHCTNGLSS-IFLMFGTVDLFNANALNMTS---NNIIIHPDYN-DKLNNDVSLIQLPEPL 133
            ||:|||||  |:|: ..::.|..|. .:|...:.|   ..:..||.:| :.:|||:|||:|..|.
 Frog    69 WVVTAAHC--GVSTRDKVVLGEHDR-GSNVEKIQSLAVAKVFTHPQWNSNTINNDISLIKLATPA 130

  Fly   134 TFSANIQAIQL--VGQYGDSIDYVGS-VATIAGFGYTEDEYLDYSETLLYAQVEIIDNADCVAIY 195
            ...|.:..:.|  :|:     ||.|. :...:|:|.|..........|....:.::.|..|.:.:
 Frog   131 VIGATVAPVCLANIGE-----DYEGGRICVTSGWGKTRYNAFTTPNQLQQTALPLLTNDQCKSYW 190

  Fly   196 GKYVVVDSTMCAKGFDGSDMSTCTGDSGGPLILYNKTIQQWQQIGINSFVAEDQCTYRLPSGYAR 260
            |..:.  .||...|..||  |:|.|||||||:.  :....|..:||.|: ....|:...|:.|||
 Frog   191 GNNIT--GTMICAGAAGS--SSCMGDSGGPLVC--QANDAWTLVGIVSW-GSSMCSTSTPAVYAR 248

  Fly   261 VS 262
            |:
 Frog   249 VA 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8952NP_573072.1 Tryp_SPc 37..268 CDD:214473 78/235 (33%)
Tryp_SPc 38..271 CDD:238113 77/234 (33%)
ctrb1XP_002944677.2 Tryp_SPc 33..256 CDD:214473 78/235 (33%)
Tryp_SPc 34..259 CDD:238113 77/234 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1522379at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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