DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG8952 and psh

DIOPT Version :9

Sequence 1:	NP_573072.1	Gene:	CG8952 / 32525	FlyBaseID:	FBgn0030688	Length:	276	Species:	Drosophila melanogaster
Sequence 2:	NP_573297.1	Gene:	psh / 32832	FlyBaseID:	FBgn0030926	Length:	394	Species:	Drosophila melanogaster

Alignment Length:	271	Identity:	77/271 - (28%)
Similarity:	121/271 - (44%)	Gaps:	34/271 - (12%)

- Green bases have known domain annotations that are detailed below.

  Fly    26 PANSSPIKIDNR------------IVSGSDAKLGQFPWQVILKRDAW-DDLLCGGSIISDTWVLT 77
            ||.::..||..|            ||.|.....|.:|....:....: .|..||||:|:..:|||
  Fly   120 PAVAACKKIRERKQQRSGNQLVIHIVGGYPVDPGVYPHMAAIGYITFGTDFRCGGSLIASRFVLT 184

  Fly    78 AAHC--TNGLSSIFLMFGTVDLFNA--NALNMTSNNIIIHPDYNDKLNNDVSLIQLPEPLTFSAN 138
            ||||  |:..:..|:..|.|::.|.  :..::...::.|||.|.....||:::::|...:..:.|
  Fly   185 AAHCVNTDANTPAFVRLGAVNIENPDHSYQDIVIRSVKIHPQYVGNKYNDIAILELERDVVETDN 249

  Fly   139 IQAIQLVGQYGDSID-YVGSVATIAGFGYTEDEYLDYSETLLYAQVEIIDNADCVAIYG------ 196
            |:...|   :.|:.| ...|...:||:|.........|:.||.|.:|::....|...|.
  Fly   250 IRPACL---HTDATDPPSNSKFFVAGWGVLNVTTRARSKILLRAGLELVPLDQCNISYAEQPGSI 311

  Fly   197 ---KYVVVDSTMCAKGFDGSDMS-TCTGDSGGPLILYNKTIQQWQQIGINSFVAEDQCTYRLPSG 257
               |..|:||.:||  .|...:: .|.|||||||| :...::......:....:...|....|..
  Fly   312 RLLKQGVIDSLLCA--IDQKLIADACKGDSGGPLI-HELNVEDGMYTIMGVISSGFGCATVTPGL 373

  Fly   258 YARVSSFLGFI 268
            |.||||:|.||
  Fly   374 YTRVSSYLDFI 384

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG8952	NP_573072.1	Tryp_SPc	37..268	CDD:214473	71/258 (28%)
CG8952	NP_573072.1	Tryp_SPc	38..271	CDD:238113	72/247 (29%)
psh	NP_573297.1	CLIP	30..79	CDD:197829
		Tryp_SPc	143..384	CDD:214473	70/246 (28%)
		Tryp_SPc	144..387	CDD:238113	72/247 (29%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45437065
Domainoid	1	1.000	70	1.000	Domainoid score	I6224
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR24260
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	3.030