DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8952 and Ctrb1

DIOPT Version :9

Sequence 1:NP_573072.1 Gene:CG8952 / 32525 FlyBaseID:FBgn0030688 Length:276 Species:Drosophila melanogaster
Sequence 2:NP_036668.1 Gene:Ctrb1 / 24291 RGDID:2444 Length:263 Species:Rattus norvegicus


Alignment Length:272 Identity:87/272 - (31%)
Similarity:133/272 - (48%) Gaps:33/272 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LVLLAAISVVGQPFD---PANSSPIKIDNRIVSGSDAKLGQFPWQVILKRDAWDDLLCGGSIISD 72
            |.|::..::||..|.   |.....:...:|||:|.||..|.:||||.| :|......||||:||:
  Rat     4 LWLVSCFALVGATFGCGVPTIQPVLTGLSRIVNGEDAIPGSWPWQVSL-QDKTGFHFCGGSLISE 67

  Fly    73 TWVLTAAHCTNGLSSIFLMFGTVDLFNANALNMTSN--NIII--------HPDYN-DKLNNDVSL 126
            .||:|||||  |:.       |.|:..|...:..|:  ||.:        :|.:| ..:.||::|
  Rat    68 DWVVTAAHC--GVK-------TSDVVVAGEFDQGSDEENIQVLKIAQVFKNPKFNMFTVRNDITL 123

  Fly   127 IQLPEPLTFSANIQAIQLVGQYGDSIDYVGSVATIAGFGYTEDEYLDYSETLLYAQVEIIDNADC 191
            ::|..|..||..:.|:.|.....|...  |:|....|:|.|:...|...|.|..|.:.|:..|||
  Rat   124 LKLATPAQFSETVSAVCLPNVDDDFPP--GTVCATTGWGKTKYNALKTPEKLQQAALPIVSEADC 186

  Fly   192 VAIYGKYVVVDSTMCAKGFDGSDMSTCTGDSGGPLILYNKTIQQWQQIGINSFVAEDQCTYRLPS 256
            ...:|. .:.|...||   ..|.:|:|.|||||||:.....:  |...||.|: ....|:...|:
  Rat   187 KKSWGS-KITDVMTCA---GASGVSSCMGDSGGPLVCQKDGV--WTLAGIVSW-GSGVCSTSTPA 244

  Fly   257 GYARVSSFLGFI 268
            .|:||::.:.::
  Rat   245 VYSRVTALMPWV 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8952NP_573072.1 Tryp_SPc 37..268 CDD:214473 81/241 (34%)
Tryp_SPc 38..271 CDD:238113 80/242 (33%)
Ctrb1NP_036668.1 Tryp_SPc 33..256 CDD:214473 81/241 (34%)
Tryp_SPc 34..259 CDD:238113 80/242 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1522379at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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