DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8952 and Ctrl

DIOPT Version :9

Sequence 1:NP_573072.1 Gene:CG8952 / 32525 FlyBaseID:FBgn0030688 Length:276 Species:Drosophila melanogaster
Sequence 2:NP_075671.1 Gene:Ctrl / 109660 MGIID:88558 Length:264 Species:Mus musculus


Alignment Length:270 Identity:84/270 - (31%)
Similarity:132/270 - (48%) Gaps:24/270 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LMLVLLAAISVVGQPFD---PANSSPIKIDNRIVSGSDAKLGQFPWQVILKRDAWDDLLCGGSII 70
            |:|.|..::.::|..:.   ||.:..:..:.|||:|.:|..|.:||||.| :|......||||:|
Mouse     2 LLLSLTLSLVLLGSSWGCGVPAITPALSYNQRIVNGENAVPGSWPWQVSL-QDNTGFHFCGGSLI 65

  Fly    71 SDTWVLTAAHCTNGLSSIFLMFGTVD-LFNANALNMTS-NNIIIHPDYN-DKLNNDVSLIQLPEP 132
            |..||:|||||.......|::.|..| ..||..:.:.| ...|.||::| :.:|||::|::|..|
Mouse    66 SPNWVVTAAHCQVTPGRHFVVLGEYDRSSNAEPVQVLSIARAITHPNWNANTMNNDLTLLKLASP 130

  Fly   133 LTFSANIQAIQLVGQYGDSIDYVGSVAT----IAGFGYTEDEYLDYSETLLYAQVEIIDNADCVA 193
            ..::|.:..:.|..........:..|.|    |:|.|......|.      ...:.::....|..
Mouse   131 ARYTAQVSPVCLASTNEALPSGLTCVTTGWGRISGVGNVTPARLQ------QVVLPLVTVNQCRQ 189

  Fly   194 IYGKYVVVDSTMCAKGFDGSDMSTCTGDSGGPLILYNKTIQQWQQIGINSFVAEDQCTYRLPSGY 258
            .:|.. :.|:.:||   .||..|:|.|||||||:....  ..|..|||.|:..:: |..:.|:.|
Mouse   190 YWGAR-ITDAMICA---GGSGASSCQGDSGGPLVCQKG--NTWVLIGIVSWGTKN-CNIQAPAMY 247

  Fly   259 ARVSSFLGFI 268
            .|||.|..:|
Mouse   248 TRVSKFSTWI 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8952NP_573072.1 Tryp_SPc 37..268 CDD:214473 77/237 (32%)
Tryp_SPc 38..271 CDD:238113 77/238 (32%)
CtrlNP_075671.1 Tryp_SPc 33..257 CDD:214473 77/237 (32%)
Tryp_SPc 34..260 CDD:238113 77/238 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1522379at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.