Sequence 1: | NP_001096987.2 | Gene: | RpIIIC160 / 32524 | FlyBaseID: | FBgn0030687 | Length: | 1383 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_014759.1 | Gene: | RPO31 / 854283 | SGDID: | S000005642 | Length: | 1460 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 1464 | Identity: | 665/1464 - (45%) |
---|---|---|---|
Similarity: | 911/1464 - (62%) | Gaps: | 124/1464 - (8%) |
- Green bases have known domain annotations that are detailed below.
Fly 13 KKISHVQFGISGADEIQQEALVRIISKNLY--QAQRQPVPYGVLDRRMGISTKDAMCETCGQGLN 75
Fly 76 ECIGHFGYLDLALPVFHIGHFRSTINILQMICKVCAHVMLKPEDRQLYEKKLHNPNFSYLGKKAL 140
Fly 141 HVQMLAKAKKVTKCPHCGSPNGGVKK-----GPGLLKILHDPYK--GRKM---DSLFTSNMNEML 195
Fly 196 RSTQTNRDLNSTLGNY--STAEELTPLMVLDLFEQIPQRDVALLGMCSHDA-----HPKHLIVTR 253
Fly 254 VFVPPACIRPSVLSEVKAGTTEDDLTMKQSEILLINDVIQRHMATGGKIELIHEDWDFLQLHVAL 318
Fly 319 YFHSE------ISGIPINMAPKKTTRGIVQRLKGKQGRFRCNLSGKRVDFSGRTVISPDPNLMIN 377
Fly 378 QVGVPVRVAKILTYPERVNPANIRHMRELVRNGPSMHPGANYVQQRGSSFKKYLAYGNREKVAQE 442
Fly 443 LKCGDVVERHLRDGDIVLFNRQPSLHKMSIMCHRAKVQPQRTFRFNECACTPYNADFDGDEMNLH 507
Fly 508 LPQTEEARAEALILMGNQSNLVTPKNGEILIAATQDFITGGYLLTQKEVFLTKEEAMQLAACFLA 572
Fly 573 NEDSTMHIKLPPPALLKPRRLWTGKQMFSLLMRPNDDSQVRLNMVNKGRNYTRNK------DLCS 631
Fly 632 NDSWIHIRNSELMCGVMDKATMGSGTKQCIFYLLLRDFGESHATKAMWRLARIASYFLQNRGFSF 696
Fly 697 GISDVTPSKKLLQHKELLLNNGYAKCNEYIELLKAGTLQCQPGCTPEETLESVMLRELSAIREQA 761
Fly 762 AKTCFAELHPTNSALIMALSGSKGSNINISQMIACVGQQAISGKRVPNGFENRALPHFERHSAIP 826
Fly 827 AARGFVQNSFYSGLTPTEFFFHTMAGREGLVDTAVKTAETGYLQRRLVKCLEDLVVHYDGTVRNA 891
Fly 892 VNEMVDTIYGGDGLDPVSMETRNKPVDLVHQYDNLRAQHPQGKDRPL-------NAEEMSEALET 949
Fly 950 L---------------LRTPEFAEARD---DFKLDVRNHINTVSKRIGQLQK------------R 984
Fly 985 YEKCID-----------LCHQIECLTTEQLLQFVRRINDRYNRAVTEPGTAVGAIAAQSIGEPGT 1038
Fly 1039 QMTLKTFHFAGVASMNITQGVPRIVEIINATKTISTPIITAELENCHSMEFARQVKARIEKTTLA 1103
Fly 1104 ELSSYVEVVCGPYSCYLAIGVDMARIKLLGLHIDLDTIVFSILK-SRMRVKPTQVEVVASQSRIV 1167
Fly 1168 VRV--EATRTSTINA------------ELARLALSLQNVVVAGLPNINRAVIAV-DDARQPPTYK 1217
Fly 1218 LCIEGYGLRDVIATYGVVGKRTRSNNICEIYQTLGIEAARTIIMSEITEVMEGHGMSVDWRHIML 1282
Fly 1283 LASQMTARGEVLGITRHGLAKMRESVFNLASFEKTADHLFDAAYYGQTDAINGVSERIILGMPAC 1347
Fly 1348 IGTGIFKLLQQHEDKQVPPIEPTICSSLNLLPSK 1381 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RpIIIC160 | NP_001096987.2 | PRK08566 | 13..919 | CDD:236292 | 457/936 (49%) |
RNAP_III_RPC1_N | 24..889 | CDD:259847 | 438/895 (49%) | ||
RNA_pol_Rpb1_5 | 839..1304 | CDD:282807 | 219/528 (41%) | ||
RNAP_III_Rpc1_C | 1013..1353 | CDD:132723 | 181/355 (51%) | ||
RPO31 | NP_014759.1 | RNAP_III_RPC1_N | 21..905 | CDD:259847 | 438/896 (49%) |
rpoC2 | 789..>1114 | CDD:235052 | 142/324 (44%) | ||
RNAP_III_Rpc1_C | 1077..1428 | CDD:132723 | 181/355 (51%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C157344440 | |
Domainoid | 1 | 1.000 | 354 | 1.000 | Domainoid score | I137 |
eggNOG | 1 | 0.900 | - | - | E1_COG0086 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H5124 | |
Inparanoid | 1 | 1.050 | 1144 | 1.000 | Inparanoid score | I17 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S1141 |
OMA | 1 | 1.010 | - | - | QHG53760 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000819 | |
OrthoInspector | 1 | 1.000 | - | - | oto99452 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100210 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR19376 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1189 |
SonicParanoid | 1 | 1.000 | - | - | X3228 | |
TreeFam | 1 | 0.960 | - | - | ||
16 | 15.740 |