Sequence 1: | NP_001096987.2 | Gene: | RpIIIC160 / 32524 | FlyBaseID: | FBgn0030687 | Length: | 1383 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_191325.1 | Gene: | NRPA1 / 824935 | AraportID: | AT3G57660 | Length: | 1670 | Species: | Arabidopsis thaliana |
Alignment Length: | 1732 | Identity: | 455/1732 - (26%) |
---|---|---|---|
Similarity: | 705/1732 - (40%) | Gaps: | 475/1732 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 15 ISHVQFGISGADEIQQEALVRIISKNLYQAQRQPVPYGVLDRRMGISTKDAMCETCGQGLNECIG 79
Fly 80 HFGYLDLALPVFHIGHFRSTINILQMICKVCAHVMLKPED--RQLYEKKLHNPNFSYLGKKALHV 142
Fly 143 QMLAKAK----------------------------------KVT------------KCPHCGSPN 161
Fly 162 GGVKK----------------GPGLLKILH-----------DPYKGRKMDSLFTSNMNEMLRST- 198
Fly 199 QTNRDLNSTLGNYSTAEELTPLMVLDLFEQIPQRD---VALLGMCSHDAHPK----HLIVTRVFV 256
Fly 257 PPACIRPSVLSEVKAGTTEDDLTMKQSEILLINDVIQRHMATGG-------KIELIHEDWDFLQL 314
Fly 315 HVALYFHSEISGIPINMAPKKTTRGIVQRLKGKQGRFRCNLSGKRVDFSGRTVISPDPNLMINQV 379
Fly 380 GVPVRVAKILTYPERVNPANIRHMRELVRNGPSMHPGANYVQQRGSSFKKYLAYGNREKVAQEL- 443
Fly 444 -----------KC-----GDVVERHLRDGDIVLFNRQPSLHKMSIMCHRAKV-QPQRTFRFNECA 491
Fly 492 CTPYNADFDGDEMNLHLPQTEEARAEALILMGNQSNLVTPKNGEILIAATQDFITGGYLLTQKEV 556
Fly 557 FLTKEEAMQL----------AACFLANED-------STMHIKLPPPALLKPRRLWTGKQMFSLLM 604
Fly 605 RPNDDSQVRLNMVNKGR----------------------------NYTRNKDLCSNDSW------ 635
Fly 636 --IHIRNSELMCGVMDKATMGSGTKQCIFYLLLRDFGESHATKAMWRL----ARIASYFLQNRGF 694
Fly 695 SFGISDVTPSKKLLQHKELLLNNGYAKCNEYIE--LLKAGTLQCQPGCTPEETLESVMLRELSAI 757
Fly 758 REQAAKTCFAELHPT----------------------------NSALIMALSGSKGSNINISQMI 794
Fly 795 ACVGQQAISGKRVPNGFENRALPHFERHSAIPAARGFVQNSFYSGLTPTEFFFHTMAGREGLVDT 859
Fly 860 AVKTAETGYLQRRLVKCLEDLVVHYDGTVRNAVNEMVDTIYGGDGLDPVSMETRNKPVDLVHQYD 924
Fly 925 NLRAQHPQGKDRPLNAEEMSEALETLLRTPEFAEARDDFKLDVRNHINTVSKRIGQLQKRYEKCI 989
Fly 990 DLCHQIECLTT-----EQLLQFVRRINDRYNRAVTEPGTAVGAIAAQSIGEPGTQMTLKTFHFAG 1049
Fly 1050 VASMNITQGVPRIVEII-NATKTISTPIITAELENCHSMEFARQVKARIEKTTLAELSSYVEVVC 1113
Fly 1114 GPYSCYL--------------------------------------------AIGVDMARI-KLLG 1133
Fly 1134 LHIDL------------------------------------------------------------ 1138
Fly 1139 --------------------DTIVF---------SILKSRMRVKPTQVEVVASQS----RIVVRV 1170
Fly 1171 EATRTSTINAE------------------LARLA------LSLQN--------VVVAGLPNI--- 1200
Fly 1201 -----NRAVIAVDDARQPPT-------YKLCIEGYGLRDVIATYGVVGKRTRSNNICEIYQTLGI 1253
Fly 1254 EAARTIIMSEITEVMEGHGMSVDWRHIMLLASQMTARGEVLGITRHGLAKMRESVFNLASFEKTA 1318
Fly 1319 DHLFDAAYYGQTDAINGVSERIILGMPACIGTGIFKLLQQHE 1360 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RpIIIC160 | NP_001096987.2 | PRK08566 | 13..919 | CDD:236292 | 311/1098 (28%) |
RNAP_III_RPC1_N | 24..889 | CDD:259847 | 301/1059 (28%) | ||
RNA_pol_Rpb1_5 | 839..1304 | CDD:282807 | 163/655 (25%) | ||
RNAP_III_Rpc1_C | 1013..1353 | CDD:132723 | 125/525 (24%) | ||
NRPA1 | NP_191325.1 | PRK14977 | 23..1668 | CDD:184940 | 454/1729 (26%) |
RNAP_I_RPA1_N | 31..1048 | CDD:259844 | 299/1060 (28%) | ||
RNAP_I_Rpa1_C | 1146..1665 | CDD:132722 | 126/528 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0086 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D591636at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.820 |