Sequence 1: | NP_001096987.2 | Gene: | RpIIIC160 / 32524 | FlyBaseID: | FBgn0030687 | Length: | 1383 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021335832.1 | Gene: | polr3a / 572258 | ZFINID: | ZDB-GENE-050208-103 | Length: | 1402 | Species: | Danio rerio |
Alignment Length: | 1400 | Identity: | 785/1400 - (56%) |
---|---|---|---|
Similarity: | 1016/1400 - (72%) | Gaps: | 33/1400 - (2%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MPKEQFRASALNKKISHVQFGISGADEIQQEALVRIISKNLY--QAQRQPVPYGVLDRRMGISTK 63
Fly 64 DAMCETCGQGLNECIGHFGYLDLALPVFHIGHFRSTINILQMICKVCAHVMLKPEDRQLYEKKLH 128
Fly 129 NPNFSYLGKKALHVQMLAKAKKVTKCPHCGSPNGGVKKGPGLLKILHDPYKGRK--MDSLFTSNM 191
Fly 192 NEMLRSTQTNRDLNSTLGNYSTAEELTPLMVLDLFEQIPQRDVALLGMCSHDAHPKHLIVTRVFV 256
Fly 257 PPACIRPSVLSEVKAGTTEDDLTMKQSEILLINDVIQRHMATGGKIELIHEDWDFLQLHVALYFH 321
Fly 322 SEISGIPINMAPKKTTRGIVQRLKGKQGRFRCNLSGKRVDFSGRTVISPDPNLMINQVGVPVRVA 386
Fly 387 KILTYPERVNPANIRHMRELVRNGPSMHPGANYVQQRGSSFKKYLAYGNREKVAQELKCGDVVER 451
Fly 452 HLRDGDIVLFNRQPSLHKMSIMCHRAKVQPQRTFRFNECACTPYNADFDGDEMNLHLPQTEEARA 516
Fly 517 EALILMGNQSNLVTPKNGEILIAATQDFITGGYLLTQKEVFLTKEEAMQLAACFLANEDSTMHIK 581
Fly 582 LPPPALLKPRRLWTGKQMFSLLMRPNDDSQVRLNMVNKGRNYT-RNKDLCSNDSWIHIRNSELMC 645
Fly 646 GVMDKATMGSGTKQCIFYLLLRDFGESHATKAMWRLARIASYFLQNRGFSFGISDVTPSKKLLQH 710
Fly 711 KELLLNNGYAKCNEYIELLKAGTLQCQPGCTPEETLESVMLRELSAIREQAAKTCFAELHPTNSA 775
Fly 776 LIMALSGSKGSNINISQMIACVGQQAISGKRVPNGFENRALPHFERHSAIPAARGFVQNSFYSGL 840
Fly 841 TPTEFFFHTMAGREGLVDTAVKTAETGYLQRRLVKCLEDLVVHYDGTVRNAVNEMVDTIYGGDGL 905
Fly 906 DPVSMETRNKPVDLVHQYDNLRAQHPQGKDRPLNAEEMSEALETLLRTPEFAEARDDF------- 963
Fly 964 -----KLDVRNHINTVSKRIGQLQKRY---------EKCIDLCHQIECLTTEQLLQFVRRINDRY 1014
Fly 1015 NRAVTEPGTAVGAIAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIVEIINATKTISTPIITA 1079
Fly 1080 ELENCHSMEFARQVKARIEKTTLAELSSYVEVVCGPYSCYLAIGVDMARIKLLGLHIDLDTIVFS 1144
Fly 1145 ILKSRMRVKPTQVEVVASQSRIVVRVEATRTSTINAELARLALSLQNVVVAGLPNINRAVIAVDD 1209
Fly 1210 ARQPPTYKLCIEGYGLRDVIATYGVVGKRTRSNNICEIYQTLGIEAARTIIMSEITEVMEGHGMS 1274
Fly 1275 VDWRHIMLLASQMTARGEVLGITRHGLAKMRESVFNLASFEKTADHLFDAAYYGQTDAINGVSER 1339
Fly 1340 IILGMPACIGTGIFKLLQQHEDKQVPPIEPTICSS 1374 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RpIIIC160 | NP_001096987.2 | PRK08566 | 13..919 | CDD:236292 | 560/910 (62%) |
RNAP_III_RPC1_N | 24..889 | CDD:259847 | 540/869 (62%) | ||
RNA_pol_Rpb1_5 | 839..1304 | CDD:282807 | 232/485 (48%) | ||
RNAP_III_Rpc1_C | 1013..1353 | CDD:132723 | 189/339 (56%) | ||
polr3a | XP_021335832.1 | RNAP_III_RPC1_N | 24..891 | CDD:259847 | 540/869 (62%) |
RNAP_III_Rpc1_C | 1033..1372 | CDD:132723 | 189/339 (56%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170584005 | |
Domainoid | 1 | 1.000 | 439 | 1.000 | Domainoid score | I533 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H5124 | |
Inparanoid | 1 | 1.050 | 1527 | 1.000 | Inparanoid score | I96 |
OMA | 1 | 1.010 | - | - | QHG53760 | |
OrthoDB | 1 | 1.010 | - | - | D591636at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000819 | |
OrthoInspector | 1 | 1.000 | - | - | oto39854 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100210 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR19376 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X3228 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
14 | 13.910 |