Sequence 1: | NP_001096987.2 | Gene: | RpIIIC160 / 32524 | FlyBaseID: | FBgn0030687 | Length: | 1383 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_523743.1 | Gene: | RpI1 / 36617 | FlyBaseID: | FBgn0019938 | Length: | 1642 | Species: | Drosophila melanogaster |
Alignment Length: | 1709 | Identity: | 458/1709 - (26%) |
---|---|---|---|
Similarity: | 732/1709 - (42%) | Gaps: | 434/1709 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 RASALNKKISHVQFGISGADEIQQEALVRIISKNLYQAQRQPVPYGVLDRRMGISTKDAM--CET 69
Fly 70 CGQGLNECIGHFGYLDLALPVFHIGHFRSTINILQMICKVCAHVMLKPEDRQLYEKKLHNPNFSY 134
Fly 135 --------LGKKAL-------------------HV----QMLAKAKK---------------VT- 152
Fly 153 --------KCPHCGSPNGGVKKGPGLLKILH---------DPYKGRKMDSLFTSNMNEMLRSTQT 200
Fly 201 NRDLNSTLGNYSTAEELTPLMVLDLFEQIPQRDVALLGMCSHDAHPKHLIV--TRVFVPPACIRP 263
Fly 264 SVLSEVKAGTTEDDLTMKQSEILLINDVIQRHMATGG--------------KIELIHED----WD 310
Fly 311 FLQLHVALYFHSEISGIPINMAPK-KTTRGIVQRLKGKQGRFRCNLSGKRVDFSGRTVISPDPNL 374
Fly 375 MINQVGVPVRVAKILTYPERVNPANIRHMRELVRNGPSMHPGANYVQQRGSSFKKYLAYGN---R 436
Fly 437 EKVAQEL----KCG-DVVERHLRDGDIVLFNRQPSLHKMSIMCHRAKV-QPQRTFRFNECACTPY 495
Fly 496 NADFDGDEMNLHLPQTEEARAEALILMGNQSNLVTPKNGEILIAATQDFITGGYLLTQKEVFLTK 560
Fly 561 EEAMQLAACFLANEDSTMHIKLPPPALLKPRRLWTGKQMFSLLM---------RPNDDSQVRLNM 616
Fly 617 VNKGRNYTRNK-DLCS--------NDSWIHIRNSELMCGVMDKATMGS---GTKQCIFYLLLRDF 669
Fly 670 GESHATKAMWRLARIASYFLQNRGFSFGISDVTPS-------KKLLQ------------------ 709
Fly 710 ---HKELL--LNNGYAKCN--------EYIELLKAGTLQCQPGCTPEETLESVMLRELSAIREQA 761
Fly 762 AKTCFAELHPTNSALIMALSGSKGSNINISQMIACVGQQAISGKRVPNGFENRALPHFERHSAIP 826
Fly 827 AARGFVQNSFYSGLTPTEFFFHTMAGREGLVDTAVKTAETGYLQRRLVKCLEDLVVHYDGTVRNA 891
Fly 892 VNEMVDTIYGGDGLDPVSME-----------TRN-----KPVDLVHQYDNLRAQHPQGKDRPLNA 940
Fly 941 EEMSEALETLLRTPEFA-EARDDFKLDVRNHIN--TVSKRIGQ----------------LQKRYE 986
Fly 987 KCID--------------LCHQIECLTTE---------QLLQFVRRINDRYNRAVTEPGTAVGAI 1028
Fly 1029 AAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIVEIIN-ATKTISTPIITAELENCHSMEFARQ 1092
Fly 1093 VKARIEKTTLAELSSYVEVVCG----PYSCYLAIGVDMARIKLL---------GL---HI----- 1136
Fly 1137 --DLDTIVFSILKSRMRVKPTQVEVVASQS----------------------------------- 1164
Fly 1165 ----------------------------------------------------------------- 1164
Fly 1165 -------------------RIVVRVEATRTSTINAELARLALSLQNVVVAGLPNINRAVI--AVD 1208
Fly 1209 DARQPPTYKLCIEGYGLRDVIATYGVVG-KRTRSNNICEIYQTLGIEAARTIIMSEITEVMEGHG 1272
Fly 1273 MSVDWRHIMLLASQMTARGEVLGITRHGLAKMRESVFNLASFEKTADHLFDAAYYGQTDAINGVS 1337
Fly 1338 ERIILGMPACIGTGIFKLL 1356 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RpIIIC160 | NP_001096987.2 | PRK08566 | 13..919 | CDD:236292 | 317/1076 (29%) |
RNAP_III_RPC1_N | 24..889 | CDD:259847 | 302/1019 (30%) | ||
RNA_pol_Rpb1_5 | 839..1304 | CDD:282807 | 167/668 (25%) | ||
RNAP_III_Rpc1_C | 1013..1353 | CDD:132723 | 117/485 (24%) | ||
RpI1 | NP_523743.1 | RNA_pol_rpoA1 | 14..1009 | CDD:274106 | 314/1050 (30%) |
RNAP_I_RPA1_N | 18..982 | CDD:259844 | 300/1019 (29%) | ||
RNA_pol_Rpb1_5 | 936..1593 | CDD:282807 | 168/675 (25%) | ||
HMG-box | 1057..1119 | CDD:294061 | 10/61 (16%) | ||
RNAP_I_Rpa1_C | 1166..1638 | CDD:132722 | 118/488 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45466353 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0086 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 293 | 1.000 | Inparanoid score | I87 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D11825at50557 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm51395 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR19376 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
7 | 6.900 |