Sequence 1: | NP_001096987.2 | Gene: | RpIIIC160 / 32524 | FlyBaseID: | FBgn0030687 | Length: | 1383 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_341389.5 | Gene: | Polr3a / 361102 | RGDID: | 1305574 | Length: | 1390 | Species: | Rattus norvegicus |
Alignment Length: | 1384 | Identity: | 795/1384 - (57%) |
---|---|---|---|
Similarity: | 1021/1384 - (73%) | Gaps: | 19/1384 - (1%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MPKEQFRASALNKKISHVQFGISGADEIQQEALVRIISKNLYQAQRQ--PVPYGVLDRRMGISTK 63
Fly 64 DAMCETCGQGLNECIGHFGYLDLALPVFHIGHFRSTINILQMICKVCAHVMLKPEDRQLYEKKLH 128
Fly 129 NPNFSYLGKKALHVQMLAKAKKVTKCPHCGSPNGGVKKGPGLLKILHDPYKGRK--MDSLFTSNM 191
Fly 192 NEMLRSTQTNRDLNSTLGNYSTAEELTPLMVLDLFEQIPQRDVALLGMCSHDAHPKHLIVTRVFV 256
Fly 257 PPACIRPSVLSEVKAGTTEDDLTMKQSEILLINDVIQRHMATGGKIELIHEDWDFLQLHVALYFH 321
Fly 322 SEISGIPINMAPKKTTRGIVQRLKGKQGRFRCNLSGKRVDFSGRTVISPDPNLMINQVGVPVRVA 386
Fly 387 KILTYPERVNPANIRHMRELVRNGPSMHPGANYVQQRGSSFKKYLAYGNREKVAQELKCGDVVER 451
Fly 452 HLRDGDIVLFNRQPSLHKMSIMCHRAKVQPQRTFRFNECACTPYNADFDGDEMNLHLPQTEEARA 516
Fly 517 EALILMGNQSNLVTPKNGEILIAATQDFITGGYLLTQKEVFLTKEEAMQLAACFLANEDSTMHIK 581
Fly 582 LPPPALLKPRRLWTGKQMFSLLMRPNDDSQVRLNMVNKGRNYT-RNKDLCSNDSWIHIRNSELMC 645
Fly 646 GVMDKATMGSGTKQCIFYLLLRDFGESHATKAMWRLARIASYFLQNRGFSFGISDVTPSKKLLQH 710
Fly 711 KELLLNNGYAKCNEYIELLKAGTLQCQPGCTPEETLESVMLRELSAIREQAAKTCFAELHPTNSA 775
Fly 776 LIMALSGSKGSNINISQMIACVGQQAISGKRVPNGFENRALPHFERHSAIPAARGFVQNSFYSGL 840
Fly 841 TPTEFFFHTMAGREGLVDTAVKTAETGYLQRRLVKCLEDLVVHYDGTVRNAVNEMVDTIYGGDGL 905
Fly 906 DPVSMETRNKPVDLVHQYDNLRAQHPQGKDRPLNAEEMSEALETLLRTPEFAEARDDFKLDVRNH 970
Fly 971 INTVSKRIGQLQKRYEKCID--------LCHQIECLTTEQLLQFVRRINDRYNRAVTEPGTAVGA 1027
Fly 1028 IAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIVEIINATKTISTPIITAELENCHSMEFARQ 1092
Fly 1093 VKARIEKTTLAELSSYVEVVCGPYSCYLAIGVDMARIKLLGLHIDLDTIVFSILKSRMRVKPTQV 1157
Fly 1158 EVVASQSRIVVRVEATRTSTINAELARLALSLQNVVVAGLPNINRAVIAVDDARQPPTYKLCIEG 1222
Fly 1223 YGLRDVIATYGVVGKRTRSNNICEIYQTLGIEAARTIIMSEITEVMEGHGMSVDWRHIMLLASQM 1287
Fly 1288 TARGEVLGITRHGLAKMRESVFNLASFEKTADHLFDAAYYGQTDAINGVSERIILGMPACIGTGI 1352
Fly 1353 FKLLQQHEDKQVPPIEPTI 1371 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RpIIIC160 | NP_001096987.2 | PRK08566 | 13..919 | CDD:236292 | 564/910 (62%) |
RNAP_III_RPC1_N | 24..889 | CDD:259847 | 543/869 (62%) | ||
RNA_pol_Rpb1_5 | 839..1304 | CDD:282807 | 238/472 (50%) | ||
RNAP_III_Rpc1_C | 1013..1353 | CDD:132723 | 194/339 (57%) | ||
Polr3a | XP_341389.5 | PRK08566 | 7..932 | CDD:236292 | 568/927 (61%) |
RNAP_III_RPC1_N | 24..891 | CDD:259847 | 543/869 (62%) | ||
RNA_pol_Rpb1_5 | 841..1317 | CDD:282807 | 243/478 (51%) | ||
RNAP_III_Rpc1_C | 1021..1360 | CDD:132723 | 194/339 (57%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166343751 | |
Domainoid | 1 | 1.000 | 449 | 1.000 | Domainoid score | I496 |
eggNOG | 1 | 0.900 | - | - | E1_COG0086 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H5124 | |
Inparanoid | 1 | 1.050 | 1561 | 1.000 | Inparanoid score | I84 |
OMA | 1 | 1.010 | - | - | QHG53760 | |
OrthoDB | 1 | 1.010 | - | - | D591636at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000819 | |
OrthoInspector | 1 | 1.000 | - | - | oto96692 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100210 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR19376 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X3228 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
16 | 15.770 |