DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpIIIC160 and UBXN7

DIOPT Version :9

Sequence 1:NP_001096987.2 Gene:RpIIIC160 / 32524 FlyBaseID:FBgn0030687 Length:1383 Species:Drosophila melanogaster
Sequence 2:NP_056377.1 Gene:UBXN7 / 26043 HGNCID:29119 Length:489 Species:Homo sapiens


Alignment Length:342 Identity:70/342 - (20%)
Similarity:121/342 - (35%) Gaps:85/342 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   850 MAGREGLVDTAVKTAETGYLQR--RLVKCLEDLVVHYDGTVRNAVNEMVDTIY---GGDGLDPVS 909
            ||...|   :|..:|..|.:|:  .:....|.:..|......|.: ||..|::   ||...:|  
Human     1 MAAHGG---SAASSALKGLIQQFTTITGASESVGKHMLEACNNNL-EMAVTMFLDGGGIAEEP-- 59

  Fly   910 METRNKPVDLV--HQYDNLRAQHPQGKDRPLNAEEMSEALETLLRTPEFAEARDDFKL------- 965
             .|.:..|..|  |..:.:||..||.::..:..|.:..|.:.........:...||:.       
Human    60 -STSSASVSTVRPHTEEEVRAPIPQKQEILVEPEPLFGAPKRRRPARSIFDGFRDFQTETIRQEQ 123

  Fly   966 DVRNHINTVSKRIGQLQKRYEKCIDLCHQ------IEC--LTTEQLLQFVRRIND---------- 1012
            ::||. ..:.|::..|...:...|||.|:      .||  :..:.|:..::.:.|          
Human   124 ELRNG-GAIDKKLTTLADLFRPPIDLMHKGSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDV 187

  Fly  1013 RYNRAV----------------TEPGT------AVGAIAAQSIGEPGTQMTLKTFHFAGVASM-- 1053
            ..|.||                :|.|.      .:|.....||.:|.|...|..:|...|:|.  
Human   188 WSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPRTGQKLVEWHQLDVSSFLD 252

  Fly  1054 -------------NITQGVP----RIVEIINATKTIS-TPIITAELENCHSMEFARQVKARIEKT 1100
                         .::...|    |...:|:|::... ...|.|.|:..|......:..:|.::.
Human   253 QVTGFLGEHGQLDGLSSSPPKKCARSESLIDASEDSQLEAAIRASLQETHFDSTQTKQDSRSDEE 317

  Fly  1101 TLAELSSYVE---VVCG 1114
            :.:||.|..|   .|||
Human   318 SESELFSGSEEFISVCG 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpIIIC160NP_001096987.2 PRK08566 13..919 CDD:236292 18/73 (25%)
RNAP_III_RPC1_N 24..889 CDD:259847 9/40 (23%)
RNA_pol_Rpb1_5 839..1304 CDD:282807 70/342 (20%)
RNAP_III_Rpc1_C 1013..1353 CDD:132723 30/147 (20%)
UBXN7NP_056377.1 UBA_UBXD7 16..51 CDD:270530 7/35 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 56..77 5/23 (22%)
UAS 149..261 CDD:239256 19/111 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 300..384 9/35 (26%)
UBX_UBXN7 412..487 CDD:340471
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0086
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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