| Sequence 1: | NP_001096987.2 | Gene: | RpIIIC160 / 32524 | FlyBaseID: | FBgn0030687 | Length: | 1383 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001074716.1 | Gene: | Polr3a / 218832 | MGIID: | 2681836 | Length: | 1390 | Species: | Mus musculus |
| Alignment Length: | 1384 | Identity: | 792/1384 - (57%) |
|---|---|---|---|
| Similarity: | 1019/1384 - (73%) | Gaps: | 19/1384 - (1%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MPKEQFRASALNKKISHVQFGISGADEIQQEALVRIISKNLYQAQRQ--PVPYGVLDRRMGISTK 63
Fly 64 DAMCETCGQGLNECIGHFGYLDLALPVFHIGHFRSTINILQMICKVCAHVMLKPEDRQLYEKKLH 128
Fly 129 NPNFSYLGKKALHVQMLAKAKKVTKCPHCGSPNGGVKKGPGLLKILHDPYKGRK--MDSLFTSNM 191
Fly 192 NEMLRSTQTNRDLNSTLGNYSTAEELTPLMVLDLFEQIPQRDVALLGMCSHDAHPKHLIVTRVFV 256
Fly 257 PPACIRPSVLSEVKAGTTEDDLTMKQSEILLINDVIQRHMATGGKIELIHEDWDFLQLHVALYFH 321
Fly 322 SEISGIPINMAPKKTTRGIVQRLKGKQGRFRCNLSGKRVDFSGRTVISPDPNLMINQVGVPVRVA 386
Fly 387 KILTYPERVNPANIRHMRELVRNGPSMHPGANYVQQRGSSFKKYLAYGNREKVAQELKCGDVVER 451
Fly 452 HLRDGDIVLFNRQPSLHKMSIMCHRAKVQPQRTFRFNECACTPYNADFDGDEMNLHLPQTEEARA 516
Fly 517 EALILMGNQSNLVTPKNGEILIAATQDFITGGYLLTQKEVFLTKEEAMQLAACFLANEDSTMHIK 581
Fly 582 LPPPALLKPRRLWTGKQMFSLLMRPNDDSQVRLNMVNKGRNYT-RNKDLCSNDSWIHIRNSELMC 645
Fly 646 GVMDKATMGSGTKQCIFYLLLRDFGESHATKAMWRLARIASYFLQNRGFSFGISDVTPSKKLLQH 710
Fly 711 KELLLNNGYAKCNEYIELLKAGTLQCQPGCTPEETLESVMLRELSAIREQAAKTCFAELHPTNSA 775
Fly 776 LIMALSGSKGSNINISQMIACVGQQAISGKRVPNGFENRALPHFERHSAIPAARGFVQNSFYSGL 840
Fly 841 TPTEFFFHTMAGREGLVDTAVKTAETGYLQRRLVKCLEDLVVHYDGTVRNAVNEMVDTIYGGDGL 905
Fly 906 DPVSMETRNKPVDLVHQYDNLRAQHPQGKDRPLNAEEMSEALETLLRTPEFAEARDDFKLDVRNH 970
Fly 971 INTVSKRIGQLQKRYEKCID--------LCHQIECLTTEQLLQFVRRINDRYNRAVTEPGTAVGA 1027
Fly 1028 IAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIVEIINATKTISTPIITAELENCHSMEFARQ 1092
Fly 1093 VKARIEKTTLAELSSYVEVVCGPYSCYLAIGVDMARIKLLGLHIDLDTIVFSILKSRMRVKPTQV 1157
Fly 1158 EVVASQSRIVVRVEATRTSTINAELARLALSLQNVVVAGLPNINRAVIAVDDARQPPTYKLCIEG 1222
Fly 1223 YGLRDVIATYGVVGKRTRSNNICEIYQTLGIEAARTIIMSEITEVMEGHGMSVDWRHIMLLASQM 1287
Fly 1288 TARGEVLGITRHGLAKMRESVFNLASFEKTADHLFDAAYYGQTDAINGVSERIILGMPACIGTGI 1352
Fly 1353 FKLLQQHEDKQVPPIEPTI 1371 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| RpIIIC160 | NP_001096987.2 | PRK08566 | 13..919 | CDD:236292 | 563/910 (62%) |
| RNAP_III_RPC1_N | 24..889 | CDD:259847 | 542/869 (62%) | ||
| RNA_pol_Rpb1_5 | 839..1304 | CDD:282807 | 236/472 (50%) | ||
| RNAP_III_Rpc1_C | 1013..1353 | CDD:132723 | 194/339 (57%) | ||
| Polr3a | NP_001074716.1 | PRK08566 | 7..932 | CDD:236292 | 567/927 (61%) |
| RNAP_III_RPC1_N | 24..891 | CDD:259847 | 542/869 (62%) | ||
| RNA_pol_Rpb1_5 | 841..1317 | CDD:282807 | 241/478 (50%) | ||
| RNAP_III_Rpc1_C | 1021..1360 | CDD:132723 | 194/339 (57%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C167839909 | |
| Domainoid | 1 | 1.000 | 446 | 1.000 | Domainoid score | I528 |
| eggNOG | 1 | 0.900 | - | - | E1_COG0086 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H5124 | |
| Inparanoid | 1 | 1.050 | 1559 | 1.000 | Inparanoid score | I94 |
| Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S1141 |
| OMA | 1 | 1.010 | - | - | QHG53760 | |
| OrthoDB | 1 | 1.010 | - | - | D591636at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0000819 | |
| OrthoInspector | 1 | 1.000 | - | - | oto93140 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_100210 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR19376 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1189 |
| SonicParanoid | 1 | 1.000 | - | - | X3228 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| 18 | 17.750 | |||||