DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL3 and MRPL9

DIOPT Version :9

Sequence 1:NP_511166.2 Gene:mRpL3 / 32523 FlyBaseID:FBgn0030686 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_011736.1 Gene:MRPL9 / 853135 SGDID:S000003452 Length:269 Species:Saccharomyces cerevisiae


Alignment Length:275 Identity:102/275 - (37%)
Similarity:144/275 - (52%) Gaps:29/275 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 NKQFVNEVGTNNFGVPAVIKDSLVKTAGPT-------ANEAVWTPNLRRCGVIARKIGQYPLWLK 115
            :|..|....|..|.|...|.:| :.|..|.       ||...|.|  :|||:|.||.|..|.:.|
Yeast    13 SKLHVRYSSTRPFLVAPSIANS-ITTEAPAINHSPELANARKWLP--KRCGLITRKKGMMPYFDK 74

  Fly   116 N-GERIRTTLLQIVDNHVIKYIPPE--EYLPAQVPTVANLHKRGCILVGSETTNPALLTKEYAGI 177
            : |||...|:|::.:..||.:...|  .|...|              ||..:.:.:.::::..|.
Yeast    75 STGERSAATILEVNNVEVIMHRTSEVNGYFACQ--------------VGYGSRHLSKVSRQMLGH 125

  Fly   178 FRNSGVLPKKNLARFIVSPEAQL-APGTPLNVNHFRVGDFVDVRGKTVDHGFQGVVKRHGFKGMP 241
            |.:..|.||:::|.|.|..|..| .|||.|..:.|:.|.:||||..:...||.||:||:||||:.
Yeast   126 FASKVVNPKEHVAEFRVKDEKGLIPPGTLLKPSFFKEGQYVDVRSVSKGKGFTGVMKRYGFKGLR 190

  Fly   242 ASHGVTKTHRRAGNIGGGGEKGRVWPGTKMPGHMGNRWRIIKGLRVWRINTKYNVMWVQGSSVAG 306
            ||||.:..||..|:.|...:.|||.||.||||||||....|:.::|.:::.:.||:||:| ||||
Yeast   191 ASHGTSIMHRHGGSYGQNQDPGRVLPGRKMPGHMGNEHVTIQNVKVLKVDDENNVIWVKG-SVAG 254

  Fly   307 PTGGLVYIYDTILPT 321
            |....|.|.|.|..|
Yeast   255 PKNSFVKIQDAIKKT 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL3NP_511166.2 RplC 101..314 CDD:294230 83/216 (38%)
MRPL9NP_011736.1 RplC 58..268 CDD:223165 88/224 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344001
Domainoid 1 1.000 86 1.000 Domainoid score I1877
eggNOG 1 0.900 - - E1_COG0087
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H31431
Inparanoid 1 1.050 147 1.000 Inparanoid score I1140
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55656
OrthoFinder 1 1.000 - - FOG0003599
OrthoInspector 1 1.000 - - oto99738
orthoMCL 1 0.900 - - OOG6_100949
Panther 1 1.100 - - LDO PTHR11229
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1153
SonicParanoid 1 1.000 - - X2474
TreeFam 1 0.960 - -
1514.790

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