DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL3 and RPL3B

DIOPT Version :10

Sequence 1:NP_511166.2 Gene:mRpL3 / 32523 FlyBaseID:FBgn0030686 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_176352.1 Gene:RPL3B / 842454 AraportID:AT1G61580 Length:390 Species:Arabidopsis thaliana


Alignment Length:134 Identity:34/134 - (25%)
Similarity:49/134 - (36%) Gaps:25/134 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 FRVGDFVDVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIG--GGGEKGRVWPGTKMPG 273
            |:..:.:|:.|.|...|::|||.|.|...:|     .||||....:.  |.....||.......|
plant   212 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-----RKTHRGLRKVACIGAWHPARVSYTVARAG 271

  Fly   274 HMGNRWRIIKGLRVWRINTKYNVMWVQGSSVAGPTGGLVYIYDTILPTRKNKEAPPFPTF--YGE 336
            ..|...|.....:|:|:           ..|...|...:..||     |..|:..|...|  ||.
plant   272 QNGYHHRTEMNKKVYRV-----------GKVGQETHSAMTEYD-----RTEKDITPMGGFPHYGI 320

  Fly   337 PQQD 340
            .::|
plant   321 VKED 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL3NP_511166.2 rpl3p 101..314 CDD:444836 25/104 (24%)
RPL3BNP_176352.1 PTZ00103 1..386 CDD:240267 34/134 (25%)

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