DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Graf and Ophn1

DIOPT Version :10

Sequence 1:NP_996441.2 Gene:Graf / 32522 FlyBaseID:FBgn0030685 Length:1025 Species:Drosophila melanogaster
Sequence 2:NP_443208.1 Gene:Ophn1 / 94190 MGIID:2151070 Length:802 Species:Mus musculus


Alignment Length:916 Identity:305/916 - (33%)
Similarity:448/916 - (48%) Gaps:142/916 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 GLEPLEFEECIVDSPDFRENLNRHEKELDHTSHQIKRIIKEVKDLMSAAKILSTRMKQLAILLND 74
            |..||||.:|.:||||||:.|..:|:||:.|:..||.:||:...|:||.:..|:.:::.:..|..
Mouse     2 GHPPLEFSDCYLDSPDFRQRLKYYEEELERTNKFIKDVIKDGSALISAMRNYSSAVQKFSQTLQS 66

  Fly    75 FNFECIGTAQTDDENVICESLKRFGAIIGNIEDEREKMLTLADKHIIESLEDFRKKQIGGVKENK 139
            |.|:.||...||||..|.||.|.|..::..:|:||..|:..|...:|:.||.|||:|||..||.|
Mouse    67 FQFDFIGDTLTDDEINIAESFKEFAELLNEVENERMMMVQNASDLLIKPLETFRKEQIGFTKERK 131

  Fly   140 KKFDKKTEKFCQSQERFLNMSTKKPENTIQEADASLGMHEREYIQESLSYVLRIQEVQERIKFEF 204
            |||:|..|:|....:|.|::|:||.|:.:.|||..:......:.:.||.||.:||||||..||..
Mouse   132 KKFEKDGERFYSLLDRHLHLSSKKKESQLLEADLQVDKERHNFFESSLDYVYQIQEVQESKKFNI 196

  Fly   205 VEILLAFISGWLVFYHTAHEQAEDHRDYLQDLRHKVQKTRENFEEAREKVTELKTKYME--KRTK 267
            ||.:|||:....:......|..:|...|.|.|:..:|.||.:|...||::.|||.:..|  :..|
Mouse   197 VEPVLAFLHSLFISNSLTVELTQDFLPYKQQLQLSLQNTRNHFSSTREEMEELKKRMKEAPQTCK 261

  Fly   268 PEEIFTKRGYLFLMEKSSILKISLLEPFKATWTKYYCTFKKQKREFTMLQFNQMNHNFTRPEARD 332
            .....|..|||:..||.: |.||        |.||||.::|:.|..||:...|      :|.|:.
Mouse   262 LPGQPTIEGYLYTQEKWA-LGIS--------WAKYYCRYEKETRMLTMIPMEQ------KPGAKQ 311

  Fly   333 DE-KLTLFSCQRRASE-FEKRFCFDLTFKEKPGVVYTFQALSEKDHRYWISAMDGTEPTYLAPGK 395
            .. .|||..|.||.:| .:||||||:...|:||.: |.||.||.:.|.|:.||||.||.|..|  
Mouse   312 GPVDLTLKYCVRRKTESIDKRFCFDIETNERPGTI-TLQAPSEANRRLWMEAMDGKEPIYHTP-- 373

  Fly   396 IKVSEAYHLDEAGFMFIRRCIQVLEIRGLEDEGIYRKSGVGTKISKLLALGLNQKESDDVFVDDK 460
            |...|...|:|.||.|:|:||..:|.:|::.||:||..|...::.|||....:.|...||   |.
Mouse   374 ITKQEEMELNEVGFKFVRKCINFIETKGIKTEGLYRTVGSNIQVQKLLYAFFDPKCPGDV---DF 435

  Fly   461 YRDLMESNTIASALKMYLRNLNEPLMTYQYHSDFIEAAKQETLNQRVNEVHKLVYKLPQPNFQML 525
            :....:..||.|:||.|||||:||:|||:.|.:.:.|||.:.|:.|:..:|.||||||:.|.:||
Mouse   436 HNSDWDIKTITSSLKFYLRNLSEPVMTYKLHKELVSAAKSDNLDYRLGAIHSLVYKLPEKNREML 500

  Fly   526 DMVICHLTDVSRKYEKNKMSVFNLGVVFGPTLLRPREESVAAILDIKFNNIVINILIDNYERIFK 590
            :::|.||.:|....::|.|:..|:||:|||||:|.:|::|||:::|||.|||:.|||:::.:|:.
Mouse   501 ELLIKHLVNVCEHSKENLMTPSNMGVIFGPTLMRAQEDTVAAMMNIKFQNIVVEILIEHFGKIYL 565

  Fly   591 NKPSADIKLPDATKAPSIMYPSRSSPPTRMPRASQIGKAASTGAMGSSSNTAGNPMFLNQQKI-Y 654
            ..|. |.::|..             ||.|:.....                  .|:.::::.: .
Mouse   566 GPPE-DSQVPPV-------------PPPRVTARRH------------------KPITISKRLLRE 598

  Fly   655 RVVSKTNCTEPTMSSSLQNIPNGDNYALGSNAMNSSGGAQCISLSPPMHMLNGILSPTIGSINNL 719
            :.|..|:..:.....|....|||   .:.||            |.|| .:|..:..|...|    
Mouse   599 KTVFYTSSLDENKDESHHQTPNG---TITSN------------LDPP-KLLQHLKPPMQKS---- 643

  Fly   720 HTISKNET-----STRRYVPDTEIAP----DYG--IIGANNGGVTLQSHHAVPVSSTSNFRHPEY 773
                 .||     |..|.|.|.:..|    |.|  :....:||.     .|.|.:|.        
Mouse   644 -----GETDPGRKSPSRPVSDCQSEPCLETDVGRLLFRLQDGGT-----KATPKASN-------- 690

  Fly   774 LMTTANPVTQSGSSSHIYTNTSSAGANSSNRISLSNVSPPNTAMRKERFLGSASG-PQQHPPVQR 837
                 .||..||     :|.|||        ..:...:|...|..||   |...| .:..||.::
Mouse   691 -----GPVPGSG-----HTKTSS--------FHIRRPAPRPMAHHKE---GDTDGFSKVRPPGEK 734

  Fly   838 GLHSYGQTKHYSPLMPTSTSSSNDSVCDSLSSNNGLGSSIVANSGNSGNVAQHLSARNTNDYALI 902
                  ||....|:.|.      |..|.|::.... .......|||:..:...:.|..|..:...
Mouse   735 ------QTIIRPPVRPP------DPPCRSITPQKP-EPKPETGSGNADEIPSSVVASRTRFFETA 786

  Fly   903 SSQNSS 908
            |.:..|
Mouse   787 SRKTGS 792

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GrafNP_996441.2 BAR_RhoGAP_OPHN1-like 27..233 CDD:153286 79/205 (39%)
BAR-PH_GRAF_family 273..390 CDD:269953 50/118 (42%)
RhoGAP 383..584 CDD:470621 90/200 (45%)
SH3_GRAF-like 967..1020 CDD:212815
Ophn1NP_443208.1 BAR_OPHN1 19..225 CDD:153317 79/205 (39%)
BAR-PH_GRAF_family 267..370 CDD:269953 50/118 (42%)
RhoGAP_Graf 363..559 CDD:239839 90/200 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 606..665 18/83 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 681..802 34/159 (21%)
Blue background indicates that the domain is not in the aligned region.

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