DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8260 and klhl40a

DIOPT Version :10

Sequence 1:NP_573069.1 Gene:CG8260 / 32521 FlyBaseID:FBgn0030684 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_001122154.1 Gene:klhl40a / 553257 ZFINID:ZDB-GENE-050916-1 Length:612 Species:Danio rerio


Alignment Length:294 Identity:58/294 - (19%)
Similarity:109/294 - (37%) Gaps:62/294 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 VEIDHEVPPEEYLVPYIQNYEC--------ADIIVTVHDRVFLCHNIILSIYSRRMLKILQEDVD 130
            :.:|....|..|....:|:..|        .|.|:.:.|:.|.||.::|:..|.....:...|::
Zfish     4 MSVDPVTEPRMYQQTLLQDGLCDLLDANKFVDCILKIKDKEFPCHRLVLAATSPYFKAMFLSDLE 68

  Fly   131 -----HIVFKSNDLSPKGFSDAYLWMISSDGEVNPCDMGEILRAAYFLDIPELLEACWANLDR-- 188
                 .||.|  |:.|........::.:||..:...::.:|..||....||.:...|.:.|.:  
Zfish    69 ESKKREIVLK--DIEPGIMGMILRYIYTSDINLTEQNVQDIFMAANMYQIPSIFSVCVSYLQQKL 131

  Fly   189 -----ITFFEISAF----RLLFELRGATNLWDVFDKLTGRISISILPVASTREFLCLSETQICYI 244
                 :..|.:...    ||..|.|         |.:..|    .|.:...::|..|..:::..|
Zfish   132 VLSNCLAIFRLGLLLDCPRLAMEAR---------DFICDR----YLLIIRDQDFHQLGPSELAAI 183

  Fly   245 LKSNFLAINSEMEAS-----------SISIRRSSTYRVLSQIRFSFLPPLMLKKFRSEELHKMPE 298
            :..:  ::|.|.|.|           ....|......:|..:||..:|....|:  ..|.|::..
Zfish   184 ITCD--SLNVEREESVFESLMDWVEYDTDERTKELPELLHCVRFRLMPTSYFKE--KVEGHRLIR 244

  Fly   299 FSDILKEFSKSPDVITLLRDSVFNSSLLLTVRNN 332
            .:..||:      .:.|::|:  ...||..|:.:
Zfish   245 TNQELKK------ELQLIKDA--QKGLLHRVKRS 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8260NP_573069.1 BTB_POZ 97..186 CDD:453885 22/93 (24%)
BACK 200..287 CDD:197943 17/97 (18%)
DUF4734 305..387 CDD:434992 5/28 (18%)
klhl40aNP_001122154.1 BTB_POZ_KLHL40_KBTBD5 7..140 CDD:349649 28/134 (21%)
PHA03098 48..540 CDD:222983 48/250 (19%)
BACK_KLHL40_KBTBD5 131..229 CDD:350591 19/112 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 266..290 1/5 (20%)
KELCH repeat 341..388 CDD:276965
Kelch 1 350..402
KELCH repeat 392..438 CDD:276965
Kelch 2 403..452
KELCH repeat 442..487 CDD:276965
Kelch 3 453..500
KELCH repeat 490..535 CDD:276965
PRK14131 500..>585 CDD:237617
Kelch 4 502..547
Kelch 5 549..604
Blue background indicates that the domain is not in the aligned region.

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