DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8260 and Klhl4

DIOPT Version :10

Sequence 1:NP_573069.1 Gene:CG8260 / 32521 FlyBaseID:FBgn0030684 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_001101714.1 Gene:Klhl4 / 317196 RGDID:1565441 Length:717 Species:Rattus norvegicus


Alignment Length:291 Identity:52/291 - (17%)
Similarity:108/291 - (37%) Gaps:51/291 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 RTLKEDPTESEIVEIDH--EVPPEEY----LVPYIQNYECADIIVTVHDRVFLCHNIILS----- 115
            |...|:|.:..::..||  .....:|    :..|::..:..|:::.........|.::||     
  Rat   141 RQYAEEPEQMNVISEDHYRSRNHADYTLCKMESYLKEKKLCDVLLIAGPLKIPAHRLVLSAVSDY 205

  Fly   116 ---IYSRRMLKILQEDVDHIVFKSNDLSPKGFSDAYLWMISSDGEVNPCDMGEILRAAYFLDIPE 177
               :::..:|:..||:|     |...:.|...:....:..:...::....:..:|.||..|.:.:
  Rat   206 FAAMFTNDVLEARQEEV-----KMEGVDPNALNSLVQYAYTGVLQLREDTIENLLSAACLLQLTQ 265

  Fly   178 LLEACWAN--LDRITFFEISAFRLLFELRGATNLWDVFDKLTGRISISILPVASTREFLCLSETQ 240
            :::.| .|  :.::........|...:.:|...|.:|..|.|..   ..:.|...:|||.|...:
  Rat   266 VIDVC-CNFLIKQLHPSNCLGIRSFGDAQGCMELQNVAHKYTME---HFIDVVKNQEFLLLPANE 326

  Fly   241 ICYILKSNFLAINSE-------ME--ASSISIRRSSTYRVLSQIRFSFLPPLMLKKFRSEEL--- 293
            |..:|.|:.:.:..|       |:  ......|:....::||.||...|.|.:|....:..:   
  Rat   327 ISKLLCSDDINVPDEETIFHALMQWVGHDAQARQQDLAKLLSYIRLPLLSPQLLADLENSSMFSG 391

  Fly   294 --------------HKMPEFSDILKEFSKSP 310
                          |.:||...:|:.....|
  Rat   392 DLECQKLLMEAMKYHLLPERRSMLQSPRTKP 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8260NP_573069.1 BTB_POZ 97..186 CDD:453885 16/98 (16%)
BACK 200..287 CDD:197943 23/95 (24%)
DUF4734 305..387 CDD:434992 1/6 (17%)
Klhl4NP_001101714.1 PHA03098 175..697 CDD:222983 45/257 (18%)
KELCH repeat 465..508 CDD:276965
KELCH repeat 512..556 CDD:276965
KELCH repeat 559..602 CDD:276965
KELCH repeat 606..657 CDD:276965
KELCH repeat 659..698 CDD:276965
Blue background indicates that the domain is not in the aligned region.

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