DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCT6 and Cpn60beta4

DIOPT Version :10

Sequence 1:NP_573066.1 Gene:CCT6 / 32518 FlyBaseID:FBgn0027329 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_173947.1 Gene:Cpn60beta4 / 839164 AraportID:AT1G26230 Length:611 Species:Arabidopsis thaliana


Alignment Length:573 Identity:125/573 - (21%)
Similarity:216/573 - (37%) Gaps:133/573 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 SAAKGLQ-------DVMRTNLGPKGTVKMLVSGAGDIKITKDGNVLLHEMQIQHPT----ASMIA 78
            |..|.||       .::...|||||...:|.:..|..:|..||..:|.|::::.|.    ..::.
plant    50 SVTKKLQAGADMVAKLLGVTLGPKGRNVVLQNKYGPPRIVNDGETVLKEIELEDPLENVGVKLVR 114

  Fly    79 RASTAQDDSTGDGTTTTVMLIGELLKQADIYLSEGLHPRIMTDGFEKARDKALEVLDQVKVPVEI 143
            :|....:|..|||:||:::|...|:.:....:|.|.:|..:..|.||. .||| ||:...:..||
plant   115 QAGAKTNDLAGDGSTTSIILAHGLITEGIKVISAGTNPIQVARGIEKT-TKAL-VLELKSMSREI 177

  Fly   144 NKKNLVEVANTSLKT--KVHPALADLLTDVCVNAVLTIASADKTKPV--DLHMVELMEM------ 198
            ....|..||..|...  :|...:::....|....|:||   :|.|.:  :|.:||.|:.      
plant   178 EDHELAHVAAVSAGNDYEVGNMISNAFQQVGRTGVVTI---EKGKYLVNNLEIVEGMQFNRGYLS 239

  Fly   199 ------QHKSDTDTQLVRGLVMDHGARHP-DMPKRLENAYILTANVSLEYEKAEVNS-------- 248
                  :.|.:.:....:.|::|....:| ||.|.|::|......|.:..|..|.::        
plant   240 PYFVTDRRKREAEFHDCKLLLVDKKITNPKDMFKILDSAVKEEFPVLIVAEDIEQDALAPVIRNK 304

  Fly   249 --GFFYKTAEEREAFVRAEREFIDQRV--------------------KKVIELKRSVCDGTDKTF 291
              |.....|.:..||...:...:|...                    |:|:...:.|....|.|.
plant   305 LKGNLKVAAIKAPAFGERKSHCLDDLAIFTGATVIRDEMGLSLEKAGKEVLGTAKRVLVTKDSTL 369

  Fly   292 VLIN---QKGIDPISLDALAKEGILALRR---------AKRRNMERLSLACGGTAMNSFDDLQEE 344
            ::.|   ||.:|         |.:..::.         .|:...||::...||.|:.....|.:.
plant   370 IVTNGFTQKAVD---------ERVSQIKNLIENTEENFQKKILNERVARLSGGIAIIQVGALTQV 425

  Fly   345 HLGYAGVVYEHVLGENKYTFVEDCKNPLSVTILIKGPNKHTITQIKDAIRDGLRAINNTIADKAL 409
            .|            ::|...|||..|                 ..|.||.:|            :
plant   426 EL------------KDKQLKVEDALN-----------------ATKSAIEEG------------I 449

  Fly   410 VPGAGAFEVRAYNELVAFKDTIKG-KSRLAVQAFADALLVIPKTLAVNSGYDAQDTIVKLTVEDR 473
            |.|.|...:|...::...|:|:.. :.::..:.|..||....:.:|.|:     ||...:.:|..
plant   450 VVGGGCALLRLATKVDRIKETLDNTEQKIGAEIFKKALSYPIRLIAKNA-----DTNGNIVIEKV 509

  Fly   474 LSPE--LVGLDLATGEPMKPVDLGVYDNYIVKKQILNSCSIIASNLLLVDEVM 524
            ||.:  :.|.:.|..:....:..|:.|...|.:..|...|.:|...|..|.|:
plant   510 LSNKNTMYGYNAAKNQYEDLMLAGIIDPTKVVRCCLEHASSVAQTFLTSDCVV 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT6NP_573066.1 TCP1_zeta 7..528 CDD:239458 125/573 (22%)
Cpn60beta4NP_173947.1 chaperonin_like 1..576 CDD:351886 125/573 (22%)

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