DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCT6 and Cpn60beta3

DIOPT Version :10

Sequence 1:NP_573066.1 Gene:CCT6 / 32518 FlyBaseID:FBgn0027329 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_200461.4 Gene:Cpn60beta3 / 835751 AraportID:AT5G56500 Length:597 Species:Arabidopsis thaliana


Alignment Length:592 Identity:137/592 - (23%)
Similarity:238/592 - (40%) Gaps:127/592 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SLLNPKAEFAR--AAQALAINI--SAAKGLQ-------DVMRTNLGPKGTVKMLVSGAGDIKITK 58
            |:...||.|.:  ||:.|..|.  :|.|.||       |::...|||||...:|.|..|..:|..
plant    38 SIAQRKARFPKIYAAKQLHFNKDGTAIKKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVN 102

  Fly    59 DGNVLLHEMQIQHPT----ASMIARASTAQDDSTGDGTTTTVMLIGELLKQADIYLSEGLHPRIM 119
            ||..:..|::::.|.    |.::.:|::..:|..||||||:|:|...|:.:....::.|.:|.::
plant   103 DGVTVAREVELEDPVENIGAKLVRQAASKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLI 167

  Fly   120 TDGFEKARDKALEVLDQVKVPVEINKKNLVEVANTSL--KTKVHPALADLLTDVCVNAVLTIASA 182
            |.|.||. .||| |.:..|:..|:....|.:||..|.  ..:|...:|:.:..|....|:|:...
plant   168 TRGIEKT-TKAL-VAELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMAKVGRKGVVTLEEG 230

  Fly   183 DKTKPVDLHMVELMEMQHKSDTDTQLVRGLVMDHGARHPDMPKRLENAYILTANVSL--EYEKAE 245
             |:....|::||                |:..|.|...|         |.:|.:..:  |||   
plant   231 -KSAENSLYVVE----------------GMQFDRGYISP---------YFVTDSEKMCAEYE--- 266

  Fly   246 VNSGFFYKTAEEREAFVRAEREFIDQRV---KKVIELKRSVCDGTDKTFVLINQKGIDPISLDAL 307
             |...|                .:|:::   :.:|.:......|.....::......:|::...:
plant   267 -NCKLF----------------LVDKKITNARDIISILEDAIKGGYPLLIIAEDIEQEPLATLVV 314

  Fly   308 AK-EG---ILALR-----RAKRRNMERLSLACGGTAMNSFDDLQ-----EEHLGYAGVVYEHVLG 358
            .| .|   :.||:     ..|.:.::.::...|.|.:.....||     .|.||.||.|   ||.
plant   315 NKLRGTIKVAALKAPGFGERKSQYLDDIAALTGATVIREEVGLQLEKVGPEVLGNAGKV---VLT 376

  Fly   359 ENKYTF-------------VEDCKN-------------------PLSVTILIKGPNKHTITQIKD 391
            ::..|.             ||..||                   .||..:.:......|.|::|:
plant   377 KDTTTIVGDGSTEEVVKKRVEQIKNLIEAAEQDYEKEKLNERIAKLSGGVAVIQVGAQTETELKE 441

  Fly   392 ---AIRDGLRAINNTIADKALVPGAGAFEVRAYNELVAFKDTI-KGKSRLAVQAFADALLVIPKT 452
               .:.|.|.|....: ::.:|.|.|...:|..:::.|.|:|: ..:.::.......||....|.
plant   442 KKLRVEDALNATKAAV-EEGIVVGGGCTLLRLASKVDAIKETLANDEEKVGADIVKKALSYPLKL 505

  Fly   453 LAVNSGYDAQDTIVKLTVEDRLSPELVGLDLATGEPMKPVDLGVYDNYIVKKQILNSCSIIASNL 517
            :|.|:|.:......|:...|  :|: .|.:.|||:....:..|:.|...|.:..|...|.:|...
plant   506 IAKNAGVNGSVVSEKVLSSD--NPK-HGYNAATGKYEDLMAAGIIDPTKVVRCCLEHASSVAKTF 567

  Fly   518 LLVDEVM 524
            |:.|.|:
plant   568 LMSDCVV 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT6NP_573066.1 TCP1_zeta 7..528 CDD:239458 136/590 (23%)
Cpn60beta3NP_200461.4 PLN03167 1..597 CDD:215611 137/592 (23%)

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