DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCT6 and AT5G26360

DIOPT Version :10

Sequence 1:NP_573066.1 Gene:CCT6 / 32518 FlyBaseID:FBgn0027329 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_198008.1 Gene:AT5G26360 / 832705 AraportID:AT5G26360 Length:555 Species:Arabidopsis thaliana


Alignment Length:509 Identity:144/509 - (28%)
Similarity:271/509 - (53%) Gaps:16/509 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 NISAAKGLQDVMRTNLGPKGTVKMLVSGAGDIKITKDGNVLLHEMQIQHPTASMIARASTAQDDS 87
            ||.|:|.:.|::||.|||:..:|||:...|.|.:|.|||.:|.|:.:.||.|..:...|..||:.
plant    24 NIQASKAVADIIRTTLGPRSMLKMLLDAGGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEE 88

  Fly    88 TGDGTTTTVMLIGELLKQADIYLSEGLHPRIMTDGFEKARDKALEVLDQVKVPVEIN-KKNLVEV 151
            .|||||:.::|.||:|..|:.:|.:..||.::...:.||.:.::.|||::.:.::|| :..::.:
plant    89 VGDGTTSVIVLAGEMLHVAEAFLEKNYHPTVICRAYIKALEDSIAVLDKIAMSIDINDRSQVLGL 153

  Fly   152 ANTSLKTKVHPALADLLTDVCVNAVLTIA--SADKTKPVDL-HMVELMEMQHKSDTDTQLVRGLV 213
            ..:.:.||......||:.|:.::|..|:.  .....:.||: ..:::.::......|:::::|::
plant   154 VKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQFEDSEVLKGVM 218

  Fly   214 MDHGARHP-DMPKRLENAYILTANVSLEYEKAEVNSGFFYKTAEEREAFVRAEREFIDQRVKKVI 277
            .:.....| .|.:::.|..|:..:..|||:|.|..:.......|:.|..::.|.|:|:....:::
plant   219 FNKDVVAPGKMKRKIVNPRIILLDCPLEYKKGENQTNAELVREEDWEVLLKLEEEYIENICVQIL 283

  Fly   278 ELKRSVCDGTDKTFVLINQKGIDPISLDALAKEGILALRRAKRRNMERLSLACGGTAMNSFDDLQ 342
            :.|..         ::|.:||:..::....:|.|:.|:||.::.:..|::.|||...:|..|:||
plant   284 KFKPD---------LVITEKGLSDLACHYFSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQ 339

  Fly   343 EEHLGY-AGVVYEHVLGENKYTFVEDCKNPLSVTILIKGPNKHTITQIKDAIRDGLRAINNTIAD 406
            |..:|. ||:.....:|::.::|:.|||.|.:.|:|::||:|..|.:::..::|.:....|.|.:
plant   340 ESDIGTGAGLFEVKKIGDDFFSFIVDCKEPKACTVLLRGPSKDFINEVERNLQDAMSVARNIIKN 404

  Fly   407 KALVPGAGAFEVRAYNELVAFKDTIKGKSRLAVQAFADALLVIPKTLAVNSGYDAQDTIVKLTVE 471
            ..||||.||.|:.....|.....||:|..:...:|.|.|...||:|||.|.|.:...|:..|..:
plant   405 PKLVPGGGATELTVSATLKQKSATIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGK 469

  Fly   472 DRLSPEL-VGLDLATGEPMKPVDLGVYDNYIVKKQILNSCSIIASNLLLVDEVM 524
            ....... .|:|..||......:..::|:|.||.|...:....|..||.:|:::
plant   470 HANGENAWTGIDGNTGAIADMKESKIWDSYNVKAQTFKTAIEAACMLLRIDDIV 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT6NP_573066.1 TCP1_zeta 7..528 CDD:239458 144/509 (28%)
AT5G26360NP_198008.1 chap_CCT_gamma 4..529 CDD:274085 144/509 (28%)

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