DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCT6 and Cpn60beta2

DIOPT Version :10

Sequence 1:NP_573066.1 Gene:CCT6 / 32518 FlyBaseID:FBgn0027329 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_187956.1 Gene:Cpn60beta2 / 820549 AraportID:AT3G13470 Length:596 Species:Arabidopsis thaliana


Alignment Length:557 Identity:123/557 - (22%)
Similarity:227/557 - (40%) Gaps:118/557 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 LQDVMRTNLGPKGTVKMLVSGAGDIKITKDGNVLLHEMQIQHPT----ASMIARASTAQDDSTGD 90
            |.|::...|||||...:|.|..|..:|..||..:..|::::.|.    |.::.:|:...:|..||
plant    74 LADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAAAKTNDLAGD 138

  Fly    91 GTTTTVMLIGELLKQADIYLSEGLHPRIMTDGFEKARDKALEVLDQVK-VPVEINKKNLVEVANT 154
            ||||:|:|....:.:....::.|.:|.::|.|.||.. |||  ::::| :..|:....|.:||..
plant   139 GTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTA-KAL--VNELKLMSKEVEDSELADVAAV 200

  Fly   155 SL--KTKVHPALADLLTDVCVNAVLTIASADKTKPVDLHMVELMEMQHKSDTDTQLVRGLVMDHG 217
            |.  ..:|...:|:.::.|....|:|:... |:...:|::||                |:..|.|
plant   201 SAGNNHEVGSMIAEAMSKVGRKGVVTLEEG-KSAENNLYVVE----------------GMQFDRG 248

  Fly   218 ARHPDMPKRLENAYILT--ANVSLEYEKAEVNSGFFYKTAEEREAFVRAEREFIDQRVKKVIELK 280
            ...|         |.:|  ..:|:||:..::                    ..:|::|....:|.
plant   249 YISP---------YFVTDSEKMSVEYDNCKL--------------------LLVDKKVTNARDLV 284

  Fly   281 RSVCDGTDKTF-VLINQKGIDPISLDALAKE------GILALR-----RAKRRNMERLSLACGGT 333
            ..:.|.....: :||..:.|:..:|..|...      .|.||:     ..|.:.::.:::..|.|
plant   285 GVLEDAIRGGYPILIIAEDIEQEALATLVVNKLRGTLKIAALKAPGFGERKSQYLDDIAILTGAT 349

  Fly   334 AMN-----SFDDLQEEHLGYAGVVYEHVLGENKYTFVED-------CKNPLSVTILIKGPNK--- 383
            .:.     |.|...:|.||.|..|   ||.:...|.|.|       .|..:.:..||:...:   
plant   350 VIREEVGLSLDKAGKEVLGNASKV---VLTKEMTTIVGDGTTQEAVNKRVVQIRNLIEQAEQDYE 411

  Fly   384 ----------------------HTITQIKD---AIRDGLRAINNTIADKALVPGAGAFEVRAYNE 423
                                  .|.|::|:   .:.|.|.|....: ::.:|.|.|...:|..::
plant   412 KEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAV-EEGIVVGGGCTLLRLASK 475

  Fly   424 LVAFKDTIKG-KSRLAVQAFADALLVIPKTLAVNSGYDAQDTIVKLTVEDRLSPELVGLDLATGE 487
            :.|.|||::. :.::..:....||....|.:|.|:|.:......|:...|.:.   .|.:.|||:
plant   476 VDAIKDTLENDEEKVGAEIVKRALSYPLKLIAKNAGVNGSVVSEKVLANDNVK---FGYNAATGK 537

  Fly   488 PMKPVDLGVYDNYIVKKQILNSCSIIASNLLLVDEVM 524
            ....:..|:.|...|.:..|...:.:|...|:.|.|:
plant   538 YEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVV 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT6NP_573066.1 TCP1_zeta 7..528 CDD:239458 123/557 (22%)
Cpn60beta2NP_187956.1 PLN03167 1..596 CDD:215611 123/557 (22%)

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