DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCT6 and CPN60A

DIOPT Version :10

Sequence 1:NP_573066.1 Gene:CCT6 / 32518 FlyBaseID:FBgn0027329 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_180367.1 Gene:CPN60A / 817344 AraportID:AT2G28000 Length:586 Species:Arabidopsis thaliana


Alignment Length:597 Identity:117/597 - (19%)
Similarity:211/597 - (35%) Gaps:168/597 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 EFARAAQALAINISAAKGLQDVMRTNLGPKGTVKMLVSGAGDIKITKDGNVLLHEMQI----QHP 72
            :.:|||....|:     .|.|.:...|||:|. .:::...|..|:..||..:...:::    ::.
plant    55 QHSRAALQAGID-----KLADCVGLTLGPRGR-NVVLDEFGSPKVVNDGVTIARAIELPNAMENA 113

  Fly    73 TASMIARASTAQDDSTGDGTTTTVMLIGELLKQADIYLSEGLHPRIMTDGFEKARDKALEVLDQV 137
            .|::|...::..:||.||||||..:|..|::|...:.::.|.:|..:..|.:|.....:|.|.:.
plant   114 GAALIREVASKTNDSAGDGTTTASILAREIIKHGLLSVTSGANPVSLKRGIDKTVQGLIEELQKK 178

  Fly   138 KVPVEINKKNLVEVANTSLKTK--VHPALADLLTDVCVNAVLTIASADKTKPVDLHMVELMEMQH 200
            ..||: .:.::..||:.|....  :...:||.:..|..:.||:|.|:.                 
plant   179 ARPVK-GRDDIRAVASISAGNDDLIGSMIADAIDKVGPDGVLSIESSS----------------- 225

  Fly   201 KSDTDTQLVRGLVMDHGARHPDM---PKRL----ENAYILTANVSLEYEK--------------- 243
            ..:|..::..|:.:|.|...|..   |::|    |||.:|..:..:...|               
plant   226 SFETTVEVEEGMEIDRGYISPQFVTNPEKLLAEFENARVLITDQKITAIKDIIPILEKTTQLRAP 290

  Fly   244 ----AEVNSGFFYKT--------------------AEEREAFVR------------------AER 266
                ||..:|....|                    .|.|:|.::                  .|.
plant   291 LLIIAEDVTGEALATLVVNKLRGVLNVVAVKAPGFGERRKAMLQDIAILTGAEYLAMDMSLLVEN 355

  Fly   267 EFIDQRVKKVIELKRSVCDGTDKTFVLINQKGIDPISLDALAKEGILALRRAKRRNM-------- 323
            ..|||     :.:.|.|....|.|.::          .||.:|:.:.|.....::.:        
plant   356 ATIDQ-----LGIARKVTISKDSTTLI----------ADAASKDELQARIAQLKKELFETDSVYD 405

  Fly   324 -----ERLSLACGGTAMNSFDDLQEEHLGYAGVVYEHVLGENKYTFVEDCKNPLSVTILIKGPNK 383
                 ||::...||.|:.......|..|            |::...:||.||.....|       
plant   406 SEKLAERIAKLSGGVAVIKVGAATETEL------------EDRKLRIEDAKNATFAAI------- 451

  Fly   384 HTITQIKDAIRDGLRAINNTIADKALVPGAGAFEVRAYNELVAFKDTIK-GKSRLAVQAFADALL 447
                                  ::.:|||.||..|.....:.|.|:|.: ...||.......|||
plant   452 ----------------------EEGIVPGGGAALVHLSTVIPAIKETFEDADERLGADIVQKALL 494

  Fly   448 VIPKTLAVNSGYDAQDTIVKLTVEDRLSPELVGLDLATGEPMKPVDLGVYDNYIVKKQILNSCSI 512
            .....:|.|:|.:.:..:.|:...|..:    |.:..|.......:.||.|...|.:..|.:.:.
plant   495 SPAALIAQNAGVEGEVVVEKIMFSDWEN----GYNAMTDTYENLFEAGVIDPAKVTRCALQNAAS 555

  Fly   513 IASNLLLVDEVM 524
            :|..:|....::
plant   556 VAGMVLTTQAIV 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT6NP_573066.1 TCP1_zeta 7..528 CDD:239458 117/597 (20%)
CPN60ANP_180367.1 GroEL 49..569 CDD:239460 117/597 (20%)

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