DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCT6 and Bbs10

DIOPT Version :9

Sequence 1:NP_573066.1 Gene:CCT6 / 32518 FlyBaseID:FBgn0027329 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_001102756.1 Gene:Bbs10 / 500832 RGDID:1560748 Length:713 Species:Rattus norvegicus


Alignment Length:616 Identity:108/616 - (17%)
Similarity:206/616 - (33%) Gaps:211/616 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 NISAAKGLQDVMRT----NLGPKGTVKMLVSGAGDIKITKDGNVLLHEMQIQHPTASMIARASTA 83
            :::||..:.:|:.|    .:||:|.:.:.....|::.:::||..||..:.::||.|.||....::
  Rat     6 SVTAALRVAEVLETIANRCVGPEGGLVLCTKPTGEVLLSRDGGCLLEALHLEHPLARMIVACVSS 70

  Fly    84 QDDSTGDGTTTTVMLIGELL--------KQADIYLSEGLHP-------------------RIMT- 120
            ....||||..|.::.:..||        |:.|.:.||.:..                   |..| 
  Rat    71 HLKKTGDGAKTFIIFLCHLLRGLHAIGEKEKDSFTSEDIQSHERHWKNCCQWKSISRALLRFQTQ 135

  Fly   121 ---------------DGFEKARD------KALEVLDQVKVPVEINKKNLVEVANTSLKTKVHPAL 164
                           ..|..:.:      ::||:|.:......:.:.|             |..:
  Rat   136 TLGCIVDQHLSRHYLSAFSSSAEGRTLCRRSLELLLEPYFCGRVGRNN-------------HRFI 187

  Fly   165 ADLLTDVCVNAVLTIASADKTKPVDLHMVEL-MEMQHKSDTDTQLVRGLVM----------DHGA 218
            :.|:.|.....:...:..:..:.:|...||| :.:.....:::::|.|||:          |.|.
  Rat   188 SQLMCDYVFKCMACESGIEVFEFLDNCFVELNVGVTGLPVSESRIVDGLVLPRDFSVYCPADGGI 252

  Fly   219 RHPDMPKRLENAYILTANVSLEYEKAEVNSGFFYKTAEE----REAFVRAEREFIDQRVKKVIEL 279
            |          ..|:|          |:....|..::.|    .|...:|.:.:|..|.|.|:..
  Rat   253 R----------MVIVT----------EILQPLFSSSSSEFVLDSETQFQASQSWIMDRTKTVMNH 297

  Fly   280 KRS----------------------------VCDGTDKTFVLINQKGIDPISLDALAKEGILALR 316
            .||                            .|..:::..::....|:.|..|..||.:..:| .
  Rat   298 LRSHNVKLLLSSVKQPDLVTYCARLNSISVVECLSSEEVSLVQRITGLSPCVLPELASQCHIA-D 361

  Fly   317 RAKRRNMERLSLACGGTAMNSFDDLQEEHLGYAGVVYEHVLGENKYTFVEDCKNPLSVTILIKGP 381
            .|..|..:.|.:..|..|          |||.....          .||..|       :::.||
  Rat   362 SALVRFCKPLIVRSGRYA----------HLGLVSTC----------AFVPHC-------VVLCGP 399

  Fly   382 NKHTITQIKDAIRDGLRAIN--------------------NTIADKALVPGAGAFEVRAYNELVA 426
            ....:.|.:.|.....:.:.                    :.:||.:....:.:.:...|.::||
  Rat   400 VLGLVQQHESAFHGAFKMLRQLFTDLDLNCMIQTKERRNPSPLADSSNRESSHSPKTGKYQDVVA 464

  Fly   427 -FKDTIKGKSRLAVQ---AFADALLVIPKTLAVN--SGYDAQDTIVKLTVEDRLSPELVGLDLAT 485
             .||.::.::||.|.   ..:|..|:..|..:.:  :..|...|   ..:..|||||        
  Rat   465 KNKDKLETQTRLEVYPRLGASDTELITCKLWSAHKETSIDPSQT---NEIPKRLSPE-------- 518

  Fly   486 GEPMKPVDLGVYDNYIVKKQILNSCSIIASN 516
                             |.:|:::|.:...|
  Rat   519 -----------------KSRIVDNCEVFLEN 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT6NP_573066.1 chap_CCT_zeta 3..532 CDD:274088 108/616 (18%)
TCP1_zeta 7..528 CDD:239458 108/616 (18%)
Bbs10NP_001102756.1 chaperonin_like 7..>94 CDD:295468 24/86 (28%)
Cpn60_TCP1 13..>424 CDD:278544 82/471 (17%)
Glyco_tranf_GTA_type <589..>673 CDD:299700
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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