DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT6 and CCT1

DIOPT Version :9

Sequence 1:NP_573066.1 Gene:CCT6 / 32518 FlyBaseID:FBgn0027329 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_524450.2 Gene:CCT1 / 42649 FlyBaseID:FBgn0003676 Length:557 Species:Drosophila melanogaster


Alignment Length:521 Identity:135/521 - (25%)
Similarity:262/521 - (50%) Gaps:27/521 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 NISAAKGLQDVMRTNLGPKGTVKMLVSGAGDIKITKDGNVLLHEMQIQHPTASMIARASTAQDDS 87
            |:.||..:.::::::|||.|..||||...||:.:|.||..:|..::::||.|.::...:..||:.
  Fly    24 NVMAALSISNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILRLLEVEHPAAKVLVELAQLQDEE 88

  Fly    88 TGDGTTTTVMLIGELLKQADIYLSEGLHPRIMTDGFEKARDKALE-VLDQVKVPV-EINKKNLVE 150
            .|||||:.|:|..||||.||..:.:.:||..:..|:..|..:|.: :.:.:..|| |:.:.:|:.
  Fly    89 VGDGTTSVVILAAELLKNADELVKQKIHPTSIISGYRIACKEACKYISEHLTAPVDELGRDSLIN 153

  Fly   151 VANTSLKTKVHPALADLLTDVCVNAVLTIASADK--TKPVDLHMVELMEMQHKSDTDTQLVRGLV 213
            :|.||:.:|:..|.|:..:.:.|:|..::...|.  .....:..:.:::...||..::.|:.|..
  Fly   154 IAKTSMSSKIIGADAEFFSAMVVDAAQSVKITDPRGQAAYSIKAINVLKAHGKSARESVLIPGYA 218

  Fly   214 MDHGARHPDMPKRLENAYILTANVSLEYEKAEVNSGFFYKTAEEREAFVRAEREFIDQRVKKVIE 278
            ::.......|||::.||.|...:.||:..|.::.........::.||....|.:...:|:..:: 
  Fly   219 LNCTIASQQMPKKIVNAKIACLDFSLQKTKMKMGVQVLINDPDKLEAIRARELDITKERINMIL- 282

  Fly   279 LKRSVCDGTDKTFVLINQKGIDPISLDALAKEGILALRRAKRRNMERLSLACGGTAMNSFDDLQE 343
                   ||....||:: .|:|.:.:....:.|.:|:||.|:.:::.::.|.|...:.|..::..
  Fly   283 -------GTGVNVVLVS-GGVDDLCMKYFVEAGAMAVRRVKKSDLKIIAKATGAAFITSLTNMDG 339

  Fly   344 EH------LGYAGVVYEHVLGENKYTFVEDCKNPLSVTILIKGPNKHTITQIKDAIRDGLRAINN 402
            |.      :|.|..|.:..:.:::...::..|...:.:|:::|||.....:::.::.|.|..:..
  Fly   340 EESFDASMVGEAAEVAQERICDDELILIKGTKARAAASIILRGPNDFYCDEMERSVHDALCVVKR 404

  Fly   403 TIADKALVPGAGAFEVRAYNELVAFKDTIKGKSRLAVQAFADALLVIPKTLAVNSGYDAQDTIVK 467
            .:..|.:|.|.|..|......|..|..::..:.:||:..||.:||||||||:||:..||.|.:.|
  Fly   405 VLESKKVVAGGGCVEAALSIYLENFATSLASREQLAIAEFAKSLLVIPKTLSVNAAKDATDLVAK 469

  Fly   468 L--------TVEDRLSPELVGLDLATGEPMKPVDLGVYDNYIVKKQILNSCSIIASNLLLVDEVM 524
            |        |..:|...:..||||..|........||.:..:.|.:.|...:..|..:|.:|:::
  Fly   470 LRSYHNSSQTKPERSDLKWTGLDLIEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMI 534

  Fly   525 R 525
            :
  Fly   535 K 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT6NP_573066.1 chap_CCT_zeta 3..532 CDD:274088 135/521 (26%)
TCP1_zeta 7..528 CDD:239458 135/521 (26%)
CCT1NP_524450.2 TCP1_alpha 12..538 CDD:239451 135/521 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453452
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11353
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.