DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT6 and cct6a

DIOPT Version :9

Sequence 1:NP_573066.1 Gene:CCT6 / 32518 FlyBaseID:FBgn0027329 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_001001208.1 Gene:cct6a / 407866 XenbaseID:XB-GENE-987462 Length:531 Species:Xenopus tropicalis


Alignment Length:533 Identity:369/533 - (69%)
Similarity:456/533 - (85%) Gaps:2/533 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASISLLNPKAEFARAAQALAINISAAKGLQDVMRTNLGPKGTVKMLVSGAGDIKITKDGNVLLH 65
            ||::..||||||.|||..|||:|||||:|||||:|||||||||:|||||||||||:|||||||||
 Frog     1 MAAVKALNPKAEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLH 65

  Fly    66 EMQIQHPTASMIARASTAQDDSTGDGTTTTVMLIGELLKQADIYLSEGLHPRIMTDGFEKARDKA 130
            ||||||||||:||:.:|||||.||||||:.|::|||||||||:|:||||||||:|:|||.|:.||
 Frog    66 EMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIVTEGFEAAKVKA 130

  Fly   131 LEVLDQVKVPVEINKKNLVEVANTSLKTKVHPALADLLTDVCVNAVLTIASADKTKPVDLHMVEL 195
            ||||:||||..|::::.|:.||.|||:||||..|||:||:..|::||.|...:  :|:||:|||:
 Frog   131 LEVLEQVKVSKEMDRETLINVARTSLRTKVHAELADILTEAVVDSVLAIRQPN--EPIDLYMVEI 193

  Fly   196 MEMQHKSDTDTQLVRGLVMDHGARHPDMPKRLENAYILTANVSLEYEKAEVNSGFFYKTAEEREA 260
            |||:||:::||.|:||||:|||||||||.||:|:|:|||.||||||||.|||||||||:|:|||.
 Frog   194 MEMKHKTESDTTLIRGLVLDHGARHPDMKKRVEDAFILTCNVSLEYEKTEVNSGFFYKSADEREK 258

  Fly   261 FVRAEREFIDQRVKKVIELKRSVCDGTDKTFVLINQKGIDPISLDALAKEGILALRRAKRRNMER 325
            .|:|||:||::||.|:|.||:.:|..|.|.|::||||||||.||||||||||:||||||||||||
 Frog   259 LVKAERKFIEERVNKIIALKQKMCGDTGKGFIVINQKGIDPFSLDALAKEGIVALRRAKRRNMER 323

  Fly   326 LSLACGGTAMNSFDDLQEEHLGYAGVVYEHVLGENKYTFVEDCKNPLSVTILIKGPNKHTITQIK 390
            |:|||||.||||.|||..|.||:||:|||:.|||.|:||:|.|:||.|||:||||||||||||||
 Frog   324 LTLACGGNAMNSVDDLTPECLGHAGLVYEYTLGEEKFTFIEQCENPRSVTLLIKGPNKHTITQIK 388

  Fly   391 DAIRDGLRAINNTIADKALVPGAGAFEVRAYNELVAFKDTIKGKSRLAVQAFADALLVIPKTLAV 455
            |||||||||:.|.|.|.::||||||.||...:.||..|..:||:::|.|||||||||:|||.||.
 Frog   389 DAIRDGLRAVKNAIEDCSVVPGAGALEVAIADALVKHKPNVKGRAQLGVQAFADALLIIPKVLAQ 453

  Fly   456 NSGYDAQDTIVKLTVEDRLSPELVGLDLATGEPMKPVDLGVYDNYIVKKQILNSCSIIASNLLLV 520
            |||||.|:|:|||..|...|.:|:|:||.|||||...:.|::|||.||||:|:||::||||:|||
 Frog   454 NSGYDPQETLVKLQTEYADSSQLIGVDLNTGEPMISSEAGIWDNYSVKKQLLHSCTVIASNILLV 518

  Fly   521 DEVMRAGMTSLKG 533
            ||:|||||:||||
 Frog   519 DEIMRAGMSSLKG 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT6NP_573066.1 chap_CCT_zeta 3..532 CDD:274088 364/528 (69%)
TCP1_zeta 7..528 CDD:239458 361/520 (69%)
cct6aNP_001001208.1 TCP1_zeta 7..526 CDD:239458 361/520 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H1336
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D207515at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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