DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT6 and cct8

DIOPT Version :9

Sequence 1:NP_573066.1 Gene:CCT6 / 32518 FlyBaseID:FBgn0027329 Length:533 Species:Drosophila melanogaster
Sequence 2:XP_005155423.1 Gene:cct8 / 394037 ZFINID:ZDB-GENE-040426-876 Length:558 Species:Danio rerio


Alignment Length:543 Identity:141/543 - (25%)
Similarity:244/543 - (44%) Gaps:46/543 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 PKA------------EFARAAQALAINISAAKGLQDVMRTNLGPKGTVKMLVSGAGDIKITKDGN 61
            |||            .::...:|:..||.|.|.|....||..||.|..||:::....:.:|.|..
Zfish     6 PKAPGFAQMLKDGAKHYSGLEEAVFRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAA 70

  Fly    62 VLLHEMQIQHPTASMIARASTAQDDSTGDGTTTTVMLIGELLKQADIYLSEGLHPRIMTDGFEKA 126
            .:|.|:::|||.|.||..||..|:...||||...::..|.||:.|:..|..||....:.:|:|.|
Zfish    71 TILRELEVQHPAAKMIVMASHMQEQEVGDGTNFVLVFAGALLELAEELLRMGLSVSEVIEGYEMA 135

  Fly   127 RDKALEVLDQVKVPVEINKKNL--VEVANTSLKTKV-------HPALADLLTDVCVNAVLTIASA 182
            ..||||:|...   |..:.|||  :|.|...:::.|       ...||:|:...||:......|.
Zfish   136 CKKALEILPDC---VCSSAKNLHDLEEATAMIRSAVMSKQYGNEDFLANLIAQACVSIFPESGSF 197

  Fly   183 DKTKPVD-LHMVELMEMQHKSDTDTQLVRGLVMDHGARHPDMPKRLENAYILTANVSLEYEKAEV 246
            :    || :.:.:::.....|.|   ::.|:|....| ..|:.. :::|.|...:...:....|.
Zfish   198 N----VDNVRVCKILGCGLNSST---MLHGMVFKKEA-EGDVTS-VKDAKIAVFSCPFDCTVTET 253

  Fly   247 NSGFFYKTAEEREAFVRAEREFIDQRVKKVIELKRSVCDGTDKTFVLINQKGIDPISLDALAKEG 311
            ......|.|:|...|.:.|.:.::.:||.:.:...||        |:...|..| ::|....|..
Zfish   254 KGTVLIKNADELMNFSKGEEDLMEAQVKAIADSGASV--------VVTGGKVAD-MALHYANKYK 309

  Fly   312 ILALRRAKRRNMERLSLACGGTAMNSFDDLQEEHLGYAGVVYEHVLGENK-YTFVEDCKNPLSVT 375
            ::.:|...:.::.||....|.||:........|.:|....||...:|:.: ..|..|.::....|
Zfish   310 LMVVRLNSKWDLRRLCKTVGATALPRLTSPTPEEMGRCDSVYLSEVGDTQVVVFKHDKEDGAIST 374

  Fly   376 ILIKGPNKHTITQIKDAIRDGLRAINNTIADKALVPGAGAFEVRAYNELVAFKDTIKGKSRLAVQ 440
            ::|:|...:.:..|:.||.||:......:.|..|.|||||.|:.....:.::.::..|..:.|::
Zfish   375 LVIRGSTDNLMDDIERAIDDGVNTFKVLVRDARLCPGAGATEIELAKHITSYGESCPGLEQYAIK 439

  Fly   441 AFADALLVIPKTLAVNSGYDAQDTIVKLTVEDRLSPELVGLDLATGEP--MKPVDLGVYDNYIVK 503
            .:|:|...:|:.||.|||....:.|.||........:..|.|:....|  ...::.|:.|.|:||
Zfish   440 KYAEAFEALPRALAENSGVKGNELISKLYATHHEGNKNSGFDIEGEGPAVRDMMEAGILDPYLVK 504

  Fly   504 KQILNSCSIIASNLLLVDEVMRA 526
            ...:...:..|..:|.||:::.|
Zfish   505 YWGIKLATNAAITVLRVDQIIMA 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT6NP_573066.1 chap_CCT_zeta 3..532 CDD:274088 141/543 (26%)
TCP1_zeta 7..528 CDD:239458 141/543 (26%)
cct8XP_005155423.1 chap_CCT_theta 10..539 CDD:274087 138/539 (26%)
Cpn60_TCP1 39..528 CDD:278544 133/510 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D207515at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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