DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT6 and mkks

DIOPT Version :9

Sequence 1:NP_573066.1 Gene:CCT6 / 32518 FlyBaseID:FBgn0027329 Length:533 Species:Drosophila melanogaster
Sequence 2:XP_021336215.1 Gene:mkks / 393134 ZFINID:ZDB-GENE-040426-757 Length:566 Species:Danio rerio


Alignment Length:601 Identity:123/601 - (20%)
Similarity:222/601 - (36%) Gaps:171/601 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 LQDVMRTNLGPKGTVKMLVSG-AGDIKITKDGNVLLHEMQIQHPTASMIARA----STAQDDS-- 87
            |::::.|..||.|.:|.:.:. .|.:..|.....||..:::..|...:|:.|    :|...||  
Zfish    29 LRNILSTAYGPTGRLKQIHNNVGGHVLTTSTSTALLKRLEMSEPLLKLISTALQHHTTRYSDSGL 93

  Fly    88 ---------------TGDGTTTTVMLIGELLKQADIYL---SEGLHPRIMTDGFEKARDKALEVL 134
                           .|..|:|.:.:...|::|.::||   |.|                     
Zfish    94 FMGIFTLTLIENTKKYGLRTSTAIKVYKHLVEQCNVYLKGDSCG--------------------- 137

  Fly   135 DQVKVPVEINK-KNLVEVANTSLKTKVHPA----------LADLLTD-------------VCVNA 175
              .|||||.:. .:||.:|::.:.:|  ||          ::.|:|.             .|...
Zfish   138 --CKVPVEFSSCDSLVALAHSMITSK--PACMLDSRETQQISSLITQAFLYSIPCNSSGTACFGR 198

  Fly   176 VLTIASADKTKPVDLHMVELMEMQHKSDTDTQLVRGLVMDHGARHPDM--PKRLENA-----YIL 233
            .:||.            :|...:.|.|     :..||::|    .|:|  |..||..     .::
Zfish   199 TVTIG------------IEGQSVNHSS-----VFPGLLLD----VPEMLLPGDLERLGDGPFKVV 242

  Fly   234 TANVSLEYEKAEVNSGFFYKTAEEREAFVRAEREFIDQRVK---KVIELKRSVCDGTDKTFVLIN 295
            ...|||..:.:||..     .|.|....:..||:.:.|.:|   :|::         ||..:...
Zfish   243 LFGVSLSGDISEVGD-----VALEVHRGLNPERDLLQQLLKIGEQVVK---------DKVSLFAC 293

  Fly   296 QKGIDPISLDALAKEGILALRRAKRRNMERLSLACGGTAMNSFDDL--QEEHLGYAGVVYEHVLG 358
            ||.:.|:....|.:..::.:.|.....||..:...|..|:.|...|  .|.:...||:.::. .|
Zfish   294 QKVVHPVLQHYLREHEVVVIERLGLALMEPFAKITGARAVASLFSLVPMEAYGLVAGLCFQD-CG 357

  Fly   359 ENKYTFVEDCKNPLSVTILIKGPNKHTITQIKDAIRDGLRA---INNTIADKALVPGAGAFEVRA 420
            ..|...:...|:....|:::...|:..:.::|.......||   :..|:.:...:.|.|..|.:.
Zfish   358 SKKLLQLLSSKHAAISTMVLCHRNETMLEELKVCAMTCQRAEHVLRLTLREPYALLGGGCTETQL 422

  Fly   421 YNELVAFKDTIK-------GKSR----LAVQAFADALLVIPKTLAVNSGYDAQDTIVKLT----- 469
            ...:.....:..       |.|.    :||::|..:||.:    |::..:|.||.::.||     
Zfish   423 ATHITHMNQSTAPTTAAALGISHSEFLMAVESFRSSLLAV----ALSLEHDGQDCLIDLTYGHRW 483

  Fly   470 ------------------VEDRLSPELVGLDLATGEPMKPVDL-------GVYDNYIVKKQILNS 509
                              :|||.:.|...|:.|. :...||.|       .|.|::..|...||.
Zfish   484 VMDISSQTEVKHTCGCGLLEDRSNLEKTHLNTAC-QTFSPVFLENNDTQPKVLDSFSAKLNALNV 547

  Fly   510 CSIIASNLLLVDEVMR 525
            ...:||.:|.|..:::
Zfish   548 AVEMASLVLDVKYIIK 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT6NP_573066.1 chap_CCT_zeta 3..532 CDD:274088 123/601 (20%)
TCP1_zeta 7..528 CDD:239458 123/601 (20%)
mkksXP_021336215.1 Cpn60_TCP1 29..565 CDD:306598 123/601 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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