DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT6 and CCT4

DIOPT Version :9

Sequence 1:NP_573066.1 Gene:CCT6 / 32518 FlyBaseID:FBgn0027329 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_609579.1 Gene:CCT4 / 34674 FlyBaseID:FBgn0032444 Length:533 Species:Drosophila melanogaster


Alignment Length:513 Identity:158/513 - (30%)
Similarity:268/513 - (52%) Gaps:30/513 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 NISAAKGLQDVMRTNLGPKGTVKMLVSGAGDIKITKDGNVLLHEMQIQHPTASMIARASTAQDDS 87
            ||.|||.:.|.:||:|||:|..||:.:|.|::.||.||..:|.:|.:.||.|.|:...|.|||.:
  Fly    30 NIQAAKAVSDAIRTSLGPRGMDKMIQAGNGEVSITNDGATILKQMNVLHPAAKMLVELSRAQDVA 94

  Fly    88 TGDGTTTTVMLIGELLKQADIYLSEGLHPRIMTDGFEKARDKALEVLDQVKVPVEI-NKKNLVEV 151
            .|||||:.|::.|.||:..:..|.:||||..::|.|::..:||:|:|.|:..|:|: :::.|::.
  Fly    95 AGDGTTSVVVIAGALLEACEKLLQKGLHPTAISDSFQRCSNKAVEILKQMSTPIELDDRETLIKS 159

  Fly   152 ANTSLKTKVHPALADLLTDVCVNAVLTIASADKTKPVDLHMVELMEMQHKSDTDTQLVRGLVMDH 216
            |:|||.:||....:.||..:.|:|||.:....|...|||..::::.....:..||:||.|||...
  Fly   160 ASTSLNSKVVSQQSSLLAPIAVDAVLKVTDPGKETSVDLKNIKVISSLGGTVEDTELVDGLVFTC 224

  Fly   217 GARHPDMPKRLENAYILTANVSLEYEKAEVNSGFFYKTAEEREAFVRAEREFIDQRVKKVIELKR 281
            .:...:.|||:|.|.|......:...|.:::...........:..::.||.:|...||   ::|:
  Fly   225 RSAGSNAPKRIEKAKIGLIQFCISAPKTDMDHNVIVSDYAAMDRVLKEERSYILNIVK---QIKK 286

  Fly   282 SVCDGTDKTFVLINQKGI--DPISLDA---LAKEGILALRRAKRRNMERL--SLACGGTAMNSFD 339
            |.|:      ||:.||.|  |.:|..|   |.|...:.::..:|.::|.:  :|.|...|  |.|
  Fly   287 SGCN------VLLVQKSILRDAVSDLAQHFLDKIKCMVVKDVEREDIEFVCKTLHCRPIA--SLD 343

  Fly   340 DLQEEHLGYAGVVYEHVLGENKYTFVEDCKN-PLSVTILIKGPNKHTITQIKDAIRDGLRAINNT 403
            ....|:|..|.:|.|...|.||:..:...:| ..:|:|:.:|.||..:.:...::.|.|..:...
  Fly   344 HFTAENLSSADLVEEVASGTNKFVKITGIQNMGRTVSIICRGSNKLVLEEAARSLHDALCVVRCL 408

  Fly   404 IADKALVPGAGAFEVRAYNELVAFKDTIKGKSRLAVQAFADALLVIPKTLAVNSGYDAQDTIVKL 468
            :..:|.:.|.||.|:....:|.|...|::|......:||||||.|||.|||.|:|.:...|:.:|
  Fly   409 VKLRAQIVGGGAPEIEMALQLAALAQTVEGVDAYCFRAFADALEVIPSTLAENAGLNPIATVTEL 473

  Fly   469 TVEDRLSPELVGLDLATGEPMKPVDLGVYDNYIVKKQILNSCSIIASNLLLVDEVMRA 526
            ........:..|:::..|        .:.|  |..:.::....:..|::.|..|.:|:
  Fly   474 RNRHAQGEKNAGINVRKG--------AITD--IFAENVVQPLLVSISSITLATETIRS 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT6NP_573066.1 chap_CCT_zeta 3..532 CDD:274088 158/513 (31%)
TCP1_zeta 7..528 CDD:239458 158/513 (31%)
CCT4NP_609579.1 TCP1_delta 18..531 CDD:239454 158/513 (31%)
Cpn60_TCP1 37..529 CDD:278544 153/506 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453408
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D207515at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11353
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

Return to query results.
Submit another query.