DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT6 and Hsp60C

DIOPT Version :9

Sequence 1:NP_573066.1 Gene:CCT6 / 32518 FlyBaseID:FBgn0027329 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_608948.2 Gene:Hsp60C / 33796 FlyBaseID:FBgn0031728 Length:576 Species:Drosophila melanogaster


Alignment Length:602 Identity:118/602 - (19%)
Similarity:221/602 - (36%) Gaps:160/602 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 AINISAAKGLQDVMRTNLGPKGTVKMLVSGAGDIKITKDG-----NVLLHEMQIQHPTASMIARA 80
            |:.:.....|.|.:...:||||...::....|..||||||     ::.|.: :.|:..|.::...
  Fly    38 AMMLQGVDVLADAVAVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIALKD-KFQNIGAKLVQDV 101

  Fly    81 STAQDDSTGDGTTTTVMLIGELLKQADIYLSEGLHPRIMTDG----FEKARDKALEVLDQVKVPV 141
            :...::..||||||..:|...:.|:....:|.|..|..:..|    .|..:|....:...|..|.
  Fly   102 ANNTNEEAGDGTTTATVLARAIAKEGFEKISRGASPVEIRRGVMLAIETVKDNLRRLSRPVNTPE 166

  Fly   142 EINKKNLVEVANTSLK--TKVHPALADLLTDVCVNAVLTIASADKTKPVDLHMVELMEMQHKSDT 204
            ||     .:||..|..  ..|...:::.:..|..:.|:|:... ||...:|.::|          
  Fly   167 EI-----CQVATISANGDKSVGNLISEAIKKVGRDGVITVKDG-KTLCDELEVIE---------- 215

  Fly   205 DTQLVRGLVMDHGARHPDMPKRLENAYILTANVSLEYEKAEVNSGFFYKTAE-EREAFVRAEREF 268
                  |:..|.|             ||               |.:|..|:: .:..|..|...|
  Fly   216 ------GMKFDRG-------------YI---------------SPYFINTSKGAKVEFQDALLLF 246

  Fly   269 IDQRVKK------VIELKRSVCDGTDKTFVLINQKGIDPISLDALAKEGILALRRAK-------- 319
            .::::|.      .:||    .:...|..|:|    .:.:..:||:   .|.:.|.|        
  Fly   247 CEKKIKSAPSIVPALEL----ANAQRKPLVII----AEDLEAEALS---TLVVNRLKVGLQVCAV 300

  Fly   320 ---------RRNMERLSLACGGTA------MNSFDDLQEEHLGYAGVV----------------- 352
                     :.|:..:::|.||..      |...:|::....|..|.|                 
  Fly   301 KAPGFGDNRKENLMDMAVATGGIVFGDEANMVRLEDIKMSDFGRVGEVVVSKDDTMLLKGKGQKA 365

  Fly   353 --------YEHVLGENKYTFVED------CKNPLSVTIL-IKGPNKHTITQIKDAIRDGLRAINN 402
                    ....:.|:..::.::      .:....|.:| :.|.:...:::.||.:.|.|.|...
  Fly   366 EVEKRVEGLREAIKESTSSYEKEKMQERLARLSSGVALLRVGGSSDVEVSEKKDRVIDALNATRA 430

  Fly   403 TIADKALVPGAGAFEVRAYNELVAFKDTIKGKS---RLAVQAFADALLVIPKTLAVNSGYDAQDT 464
            .: ::.:|||.|...:|...:|    :.:||.:   .:.::....||.:...|:|.|:|.|....
  Fly   431 AV-EEGIVPGGGTALLRCIQKL----NDLKGANEDQNMGIEIIRRALRMPCLTIAKNAGVDGAMV 490

  Fly   465 IVKLTVEDRLSPELVGLDLATGEPMKPVDLGVYDNYIVKKQILNSCSIIASNLLLVDEVM----- 524
            :.|:.:.|    ...|.|...||....::.|:.|...|.:..::..:.:||.|...:.|:     
  Fly   491 VAKVEILD----GDYGYDALKGEYGNMIERGIIDPTKVVRTAISDAAGVASLLTTAEAVVTELPL 551

  Fly   525 --------RAGMTSLKG 533
                    .||:.:|.|
  Fly   552 EEAAAAGAAAGLGALGG 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT6NP_573066.1 chap_CCT_zeta 3..532 CDD:274088 116/599 (19%)
TCP1_zeta 7..528 CDD:239458 115/595 (19%)
Hsp60CNP_608948.2 PTZ00114 23..553 CDD:185455 114/585 (19%)
GroEL 28..548 CDD:239460 114/580 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453449
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.830

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