DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT6 and cct5

DIOPT Version :9

Sequence 1:NP_573066.1 Gene:CCT6 / 32518 FlyBaseID:FBgn0027329 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_997778.1 Gene:cct5 / 322258 ZFINID:ZDB-GENE-030131-977 Length:541 Species:Danio rerio


Alignment Length:522 Identity:169/522 - (32%)
Similarity:278/522 - (53%) Gaps:28/522 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 QALAINISAAKGLQDVMRTNLGPKGTVKMLVSGAGDIKITKDGNVLLHEMQIQHPTASMIARAST 82
            :||..:|.|||.:.:.:||:|||.|..||:|...|::.:|.||..:|..|.:.|..|.::...|.
Zfish    32 EALKSHILAAKAVANTLRTSLGPNGLDKMMVDKDGEVTVTNDGATILSMMDVDHQIAKLMVELSK 96

  Fly    83 AQDDSTGDGTTTTVMLIGELLKQADIYLSEGLHPRIMTDGFEKARDKALEVLDQV--KVPVEINK 145
            :|||..|||||..|:|.|.||:||:..|..|:||..:.||:::|...|:|.||::  ..||:.|.
Zfish    97 SQDDEIGDGTTGVVVLAGALLEQAEQLLDRGIHPIRIADGYDQAAKIAIEQLDKIGDSFPVDPNN 161

  Fly   146 -KNLVEVANTSLKTKVHPALADLLTDVCVNAVLTIASADKTKPVDLHMVELMEMQHKSDTDTQLV 209
             ::||:.|.|:|.:||.......:.::.|||:||:|..:: |.||..::::.........||||:
Zfish   162 TESLVQTAMTTLGSKVINRCHRQMAEIAVNAILTVADMER-KDVDFELIKVEGKVGGKLEDTQLI 225

  Fly   210 RGLVMDHGARHPDMPKRLENAYILTANVSLEYEKAEVNSGFFYKTAEEREAFVRAEREFIDQRVK 274
            :|:::|....||.|||.|::..|.......|..|.:........:.|:.:|..:.|::...:.::
Zfish   226 KGVIVDKEFSHPQMPKVLKDTKIAILTCPFEPPKPKTKHKLDVTSVEDYKALQKYEKDKFQEMIR 290

  Fly   275 KVIELKRSVCDGTDKTFVLINQKGIDPISLDALAKEGILALRRAKRRNMERLSLACGGTAMNSFD 339
            :|.|      :|.:   :.|.|.|.|..:...|.:..:.|:|......:|.:::|.||..:..|.
Zfish   291 QVKE------NGAN---LAICQWGFDDEANHLLLQNELPAIRWVGGPEIELIAIATGGRIVPRFC 346

  Fly   340 DLQEEHLGYAGVVYEHVLG--ENKYTFVEDCKNPLSVTILIKGPNKHTITQIKDAIRDGLRAINN 402
            :|..|.||.||:|.|...|  :::...:|:|||..:|||.|:|.||..|.:.|.|:.|.|..|.|
Zfish   347 ELTPEKLGTAGLVKEICFGTTKDRMLVIEECKNSRAVTIFIRGGNKMIIEEAKRALHDALCVIRN 411

  Fly   403 TIADKALVPGAGAFEVR---AYNELVAFKDTIKGKSRLAVQAFADALLVIPKTLAVNSGYDAQDT 464
            .:.|..:|.|.||.|:.   |.||..   |......:.|::||||||.|||..||.|||.:...|
Zfish   412 LVRDNRIVYGGGASEIACALAVNEAA---DKCPSLEQYAMRAFADALEVIPMALAENSGLNPIQT 473

  Fly   465 IVKLTVED-RLSPELVGLD---LATGEPMKPVDLGVYDNYIVKKQILNSCSIIASNLLLVDEVMR 525
            :.::.... :.:...:|:|   |:|.: ||  ...|.:..|.|||.::..:.:...:|.:|::..
Zfish   474 MTEVRARQVKENNSALGIDCLHLSTND-MK--QQHVIETLIGKKQQISLATQVVKMILKIDDIRG 535

  Fly   526 AG 527
            .|
Zfish   536 PG 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT6NP_573066.1 chap_CCT_zeta 3..532 CDD:274088 169/522 (32%)
TCP1_zeta 7..528 CDD:239458 169/522 (32%)
cct5NP_997778.1 TCP1_epsilon 10..535 CDD:239455 168/518 (32%)
Cpn60_TCP1 44..533 CDD:278544 162/504 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D207515at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.