DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT6 and CCT2

DIOPT Version :9

Sequence 1:NP_573066.1 Gene:CCT6 / 32518 FlyBaseID:FBgn0027329 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_572524.1 Gene:CCT2 / 31838 FlyBaseID:FBgn0030086 Length:535 Species:Drosophila melanogaster


Alignment Length:543 Identity:147/543 - (27%)
Similarity:273/543 - (50%) Gaps:49/543 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LNP-----------KAEFARAAQ---ALAINISAAKGLQDVMRTNLGPKGTVKMLVS---GAGDI 54
            |||           |||.||.:.   |:||.        |::::.|||||..|:||:   .||.:
  Fly     5 LNPVRVLKNEAQEEKAEMARLSSFIGAIAIG--------DLVKSTLGPKGMDKILVATGRNAGHV 61

  Fly    55 KITKDGNVLLHEMQIQHPTASMIARASTAQDDSTGDGTTTTVMLIGELLKQADIYLSEGLHPRIM 119
            ::|.||..:|..:.:.:|.|.::...|..||:..|||||:..:|..|||::|:..:.:.|||:|:
  Fly    62 EVTNDGATILRAVGVDNPAAKILVDMSRVQDEEVGDGTTSVTVLASELLREAEKLVEQKLHPQII 126

  Fly   120 TDGFEKARDKALEVLDQV----KVPVEINKKNLVEVANTSLKTKVHPALADLLTDVCVNAVLTIA 180
            ..|:.:|...|||.|...    ....|..:.:|:.:|.|:|.:|:.....|...::.|:||:.:.
  Fly   127 VSGWRQATQVALEALTAAAQDNSSSDEKFRNDLLNIARTTLSSKILHQHKDFFANLAVDAVMRLK 191

  Fly   181 SADKTKPVDLHMVELMEMQHKSDTDTQLVRGLVMDHGARHPDM--PKRLENAYILTANVSLEYEK 243
            .:.     :|..:::::....:..|:.|..|.::|   :.|.:  |:|:|||.||.||..::.:|
  Fly   192 GSG-----ELKSIQIIKKSGGTLGDSFLDEGFLLD---KKPGVHQPQRIENARILIANTPMDTDK 248

  Fly   244 AEV-NSGFFYKTAEEREAFVRAEREFIDQRVKKVIELKRSVCDGTDKTFVLINQKGIDPISLDAL 307
            .:| .|.....:..:......||:|.:.::|.|:::.|   |:      |.||::.|........
  Fly   249 IKVFGSSIKVDSLAKIADLEMAEKEKMKEKVDKILKHK---CN------VFINRQLIYNYPEQLF 304

  Fly   308 AKEGILALRRAKRRNMERLSLACGGTAMNSFDDLQEEHLGYAGVVYEHVLGENKYTFVEDCKNPL 372
            |...::::..|....:|||:...||..:::|::.....||...|:.:.::||:........|...
  Fly   305 ADARVMSIEHADFDGIERLAYCTGGEIVSTFENPSLVKLGECDVIEQVMIGEDTLLRFSGVKLGE 369

  Fly   373 SVTILIKGPNKHTITQIKDAIRDGLRAINNTIADKALVPGAGAFEVRAYNELVAFKDTIKGKSRL 437
            :.||:|:|..:..:.:...::.|.|..:..|:.:..::.|.|..|......::.......||..:
  Fly   370 ACTIVIRGATQQILDEADRSLHDALCVLAATVKESRIIFGGGCSEALMATAVLKKAAETPGKEAI 434

  Fly   438 AVQAFADALLVIPKTLAVNSGYDAQDTIVKLTVEDRLSPELVGLDLATGEPMKPVDLGVYDNYIV 502
            |::|||.|||.:|..:|.|:|||:...:.:|........:.:|||:..|:.....:||:.:::.|
  Fly   435 AIEAFARALLSLPTAIADNAGYDSAQLVSELRAGHAQGKQTLGLDMELGKVADVRELGITESFAV 499

  Fly   503 KKQILNSCSIIASNLLLVDEVMR 525
            |:|:|.|.|..|..:|.||.::|
  Fly   500 KRQVLMSASEAAEMILRVDNIIR 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT6NP_573066.1 chap_CCT_zeta 3..532 CDD:274088 147/543 (27%)
TCP1_zeta 7..528 CDD:239458 147/543 (27%)
CCT2NP_572524.1 PTZ00212 1..530 CDD:185514 147/543 (27%)
TCP1_beta 10..527 CDD:239452 144/538 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453438
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11353
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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