DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCT6 and Mkks

DIOPT Version :9

Sequence 1:NP_573066.1 Gene:CCT6 / 32518 FlyBaseID:FBgn0027329 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_001008354.1 Gene:Mkks / 311456 RGDID:1308814 Length:570 Species:Rattus norvegicus


Alignment Length:485 Identity:99/485 - (20%)
Similarity:189/485 - (38%) Gaps:78/485 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 ISAAKGLQDVMRTNLGPKGTVKMLVSGAGD-IKITKDGNVLLHEMQIQHPTASMIARASTAQD-- 85
            :|..||   ::.:..||.|.:|.|.:|.|. :..|...:.||..:.:.||...::  .|:.|:  
  Rat    26 LSVLKG---IIASCYGPSGRLKQLHNGLGGCVCTTSQSSALLRNLSVTHPILKVL--TSSVQNHV 85

  Fly    86 ---------------------DSTGDGTTTTVMLIGELLKQADIYL-SEGLHPRIMTDGFEKARD 128
                                 ...|...||.:.|...||..:..|| ||....||..|  .::..
  Rat    86 CCFSDCGLFTAILCCNLIENIQRIGLTPTTAIKLNKYLLGLSISYLKSEACSCRIPVD--FRSTH 148

  Fly   129 KALEVLDQV---KVPVEINKKNLVEVANTSLKTKVHPALADLLTDVCVNAVLTIASADKTKPVDL 190
            ..|.::..:   |....:.:|.:..:....||.                .:|||..:.:.:.| |
  Rat   149 TFLNLVHSILTSKPACMLTRKEIDHIGALILKA----------------FLLTIPESAEERMV-L 196

  Fly   191 HMVELMEMQHKSDTDTQLVRGLVMDHGARHPDMPKRLENAYILTANVSLEYEKAEVNSGFFYKTA 255
            ....::.::.:..||:.::.||:::  |....:.:.|......|..|:|.....   ||.| ..|
  Rat   197 GKSIIVPLKGQQVTDSTVLPGLLIE--ASEVQLRRLLPTQKSSTLRVALFCASL---SGDF-SNA 255

  Fly   256 EEREAFVRAEREFIDQRVKKVIELKRSVCDGTDKTFVLINQKGIDPISLDALAKEGILALRRAKR 320
            .|....|..:....:..:::::.|.|.:.  :|...:::.||.|.|.....|::..|:|:.|...
  Rat   256 GEGTLVVHYQVSLENAVLEQLLNLGRQLV--SDHVDLVLCQKVIHPSLKQFLSEHQIIAIDRVGV 318

  Fly   321 RNMERLSLACGGTAMNSFDDLQEEHLGYAGVVYEHVLGENKYTFVEDCKNPLSV-TILIKGPNKH 384
            ..||.||...|.|.:.|...:.....|....|.....| :|| |.....|..:: ::|:...|..
  Rat   319 TLMEPLSKVTGATPIGSLYPIVSTTYGSVKDVRSARFG-SKY-FFHLLPNEATICSLLLCSRNDT 381

  Fly   385 TITQIKDAIRDGLRAINNTIADKALVPGAGAFEV--------RAYNE---LVAFKDTIKGKSRLA 438
            ...::|...:..:..:..||.:..::.|.|..|.        :.:||   :|......:.:..:|
  Rat   382 AWEELKLTCQTAMHVLQLTIKEPWVLLGGGCVETHLAAYIRHKVHNEAEAIVRDDGCSQAELHIA 446

  Fly   439 VQAFADALLVIPKTLAVNSGYDAQDTIVKL 468
            .:||..||    ::.||:..:|..:.::.:
  Rat   447 TEAFCSAL----ESAAVSLEHDGGEILIDM 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT6NP_573066.1 chap_CCT_zeta 3..532 CDD:274088 99/485 (20%)
TCP1_zeta 7..528 CDD:239458 99/485 (20%)
MkksNP_001008354.1 Cpn60_TCP1 29..569 CDD:278544 98/482 (20%)
chaperonin_like 32..456 CDD:295468 93/458 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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