DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT6 and Cct2

DIOPT Version :9

Sequence 1:NP_573066.1 Gene:CCT6 / 32518 FlyBaseID:FBgn0027329 Length:533 Species:Drosophila melanogaster
Sequence 2:XP_038934664.1 Gene:Cct2 / 299809 RGDID:1359143 Length:561 Species:Rattus norvegicus


Alignment Length:547 Identity:149/547 - (27%)
Similarity:274/547 - (50%) Gaps:50/547 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASISLLNPKAEFARAAQALAINISAAKGLQDVMRTNLGPKGTVKMLVSGAGD--IKITKDGNVL 63
            :|.:::....|:..||..|...:...|..:.|::::.|||||..|:|:|...|  :.:|.||..:
  Rat    32 LAPVNIFKAGADEERAETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATI 96

  Fly    64 LHEMQIQHPTASMIARASTAQDDSTGDGTTTTVMLIGELLKQADIYLSEGLHPRIMTDGFEKARD 128
            |..:.:.:|.|.::...|..|||..|||||:..:|..|||::|:..:::.:||:.:..|:.:|..
  Rat    97 LKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATK 161

  Fly   129 KALEVL---------DQVKVPVEINKKNLVEVANTSLKTKVHPALADLLTDVCVNAVLTIASADK 184
            .|.|.|         |:||.     .::|:.:|.|:|.:|:.....|..|.:.|.|||.:..:. 
  Rat   162 AAREALLSSAVDHGSDEVKF-----WQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLKGSG- 220

  Fly   185 TKPVDLHMVELMEMQHKSDTDTQLVRGLVMDH--GARHPDMPKRLENAYILTANVSLEYEKAEVN 247
                :|..:.:::....|..|:.|..|.::|.  |.   :.|||:|||.||.||..::.:|.:: 
  Rat   221 ----NLEAIHVIKKLGGSLADSYLDEGFLLDKKIGV---NQPKRIENAKILIANTGMDTDKIKI- 277

  Fly   248 SGFFYKTAEEREAFV----RAEREFIDQRVKKVIELKRSV-CDGTDKTFVLINQKGIDPISLDAL 307
              |..:...:..|.|    .||:|.:.::|:::  ||..: |        .||::.|........
  Rat   278 --FGSRVRVDSTAKVAEIEHAEKEKMKEKVERI--LKHGINC--------FINRQLIYNYPEQLF 330

  Fly   308 AKEGILALRRAKRRNMERLSLACGGTAMNSFDDLQEEHLGYAGVVYEHVLGENKYTFVEDCKNPL 372
            ...|::|:..|....:|||:|..||...::||..:...||...::.|.::||:|...........
  Rat   331 GAAGVMAIEHADFAGVERLALVTGGEIASTFDHPELVKLGSCKLIEEVMIGEDKLIHFSGVALGE 395

  Fly   373 SVTILIKGPNKHTITQIKDAIRDGLRAINNTIADKALVPGAGAFEVRAYNELVAFKDTIKGKSRL 437
            :.||:::|..:..:.:.:.::.|.|..:..|:.|...|.|.|..|:...:.:........||..:
  Rat   396 ACTIVLRGATQQILDEAERSLHDALCVLAQTVKDPRTVYGGGCSEMLMAHAVTMLASRTPGKEAV 460

  Fly   438 AVQAFADALLVIPKTLAVNSGYDAQDTIVKLTV---EDRLSPELVGLDLATGEPMKPVDLGVYDN 499
            |:::||.||.::|..:|.|:|||:.|.:.:|..   |.|::   .|||:..|.......||:.::
  Rat   461 AMESFAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGRIT---AGLDMKEGSIGDMAVLGITES 522

  Fly   500 YIVKKQILNSCSIIASNLLLVDEVMRA 526
            :.||:|:|.|.:..|..:|.||.:::|
  Rat   523 FQVKRQVLLSAAEAAEVILRVDNIIKA 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT6NP_573066.1 chap_CCT_zeta 3..532 CDD:274088 148/545 (27%)
TCP1_zeta 7..528 CDD:239458 148/541 (27%)
Cct2XP_038934664.1 TCP1_beta 37..553 CDD:239452 148/542 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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