DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT6 and Cct8

DIOPT Version :9

Sequence 1:NP_573066.1 Gene:CCT6 / 32518 FlyBaseID:FBgn0027329 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_001099367.2 Gene:Cct8 / 288305 RGDID:1305452 Length:548 Species:Rattus norvegicus


Alignment Length:552 Identity:144/552 - (26%)
Similarity:241/552 - (43%) Gaps:64/552 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 PKA------------EFARAAQALAINISAAKGLQDVMRTNLGPKGTVKMLVSGAGDIKITKDGN 61
            |||            .|:...:|:..||.|.|.|....||..||.|..||:::....:.:|.|..
  Rat     6 PKAPGFAQMLKDGAKHFSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINRLEKLFVTNDAA 70

  Fly    62 VLLHEMQIQHPTASMIARASTAQDDSTGDGTTTTVMLIGELLKQADIYLSEGLHPRIMTDGFEKA 126
            .:|.|:::|||.|.||..||..|:...||||...::..|.||:.|:..|..||....:..|:|.|
  Rat    71 TILRELEVQHPAAKMIVMASHMQEQEVGDGTNFVLVFAGALLELAEELLRIGLSVSEVITGYEIA 135

  Fly   127 RDKALEVLDQVKVPVEINKKNLVEVAN---TSLKTKVHPA---LADLLTDVCVN----------- 174
            ..||.|:|..:......|.:::.||::   ||:.:|.:.:   ||.|::..||:           
  Rat   136 CKKAHEILPDLVCCSAKNLRDVDEVSSLLRTSIMSKQYGSEEFLAKLISQACVSIFPDSGNFNVD 200

  Fly   175 --AVLTIASADKTKPVDLHMVELMEMQHKSDTDTQLVRGLVMDHGARHPDMPKRLENAYILTANV 237
              .|..|..:.......||     .|..|.:|:..:.                .:::|.|...:.
  Rat   201 NIRVCKILGSGVYSSSVLH-----GMVFKKETEGDVT----------------SVKDAKIAVYSC 244

  Fly   238 SLEYEKAEVNSGFFYKTAEEREAFVRAEREFIDQRVKKVIELKRSVCDGTDKTFVLINQKGIDPI 302
            ..:....|.......|||||...|.:.|...:|.:||.:.        ||....::...|..| :
  Rat   245 PFDGMITETKGTVLIKTAEELMNFSKGEENLMDAQVKAIA--------GTGANVIVTGGKVAD-M 300

  Fly   303 SLDALAKEGILALRRAKRRNMERLSLACGGTAMNSFDDLQEEHLGYAGVVYEHVLGENK-YTFVE 366
            :|....|..|:.:|...:.::.||....|.||:........|.:|:...||...:|:.: ..|..
  Rat   301 ALHYANKYNIMLVRLNSKWDLRRLCKTVGATALPKLTPPVLEEMGHCDSVYLSEVGDTQVVVFKH 365

  Fly   367 DCKNPLSVTILIKGPNKHTITQIKDAIRDGLRAINNTIADKALVPGAGAFEVRAYNELVAFKDTI 431
            :.::....||:::|...:.:..|:.|:.||:........||.||||.||.|:....::.::.:|.
  Rat   366 EKEDGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETC 430

  Fly   432 KGKSRLAVQAFADALLVIPKTLAVNSGYDAQDTIVKLTVEDRLSPELVGLDLATGEP--MKPVDL 494
            .|..:.|::.||:|...||:.||.|||..|.:.|.||....:...:.||||:....|  ...::.
  Rat   431 PGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYSVHQEGNKNVGLDIEAEVPAVKDMLEA 495

  Fly   495 GVYDNYIVKKQILNSCSIIASNLLLVDEVMRA 526
            .:.|.|:.|...:...:..|..:|.||:::.|
  Rat   496 SILDTYLGKYWAIKLATNAAVTVLRVDQIIMA 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT6NP_573066.1 chap_CCT_zeta 3..532 CDD:274088 144/552 (26%)
TCP1_zeta 7..528 CDD:239458 144/552 (26%)
Cct8NP_001099367.2 chap_CCT_theta 10..539 CDD:274087 141/548 (26%)
Cpn60_TCP1 39..528 CDD:278544 135/519 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D207515at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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