DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT6 and cct2

DIOPT Version :9

Sequence 1:NP_573066.1 Gene:CCT6 / 32518 FlyBaseID:FBgn0027329 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_958863.1 Gene:cct2 / 192326 ZFINID:ZDB-GENE-020419-6 Length:535 Species:Danio rerio


Alignment Length:544 Identity:146/544 - (26%)
Similarity:277/544 - (50%) Gaps:44/544 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASISLLNPKAEFARAAQALAINISAAKGLQDVMRTNLGPKGTVKMLVSGAGD--IKITKDGNVL 63
            ||.:|:....|:..:|..|...:...|..:.|::::.|||||..|:|:.|..:  :.:|.||..:
Zfish     6 MAPVSIFKHGADEEKAETARLSSFIGAIAIGDLVKSTLGPKGMDKILLGGGRESTVTVTNDGATI 70

  Fly    64 LHEMQIQHPTASMIARASTAQDDSTGDGTTTTVMLIGELLKQADIYLSEGLHPRIMTDGFEKARD 128
            |..:.:.:|.|.::...|..|||..|||||:..:|..|||::|::.:::.:||:|:..|:.||..
Zfish    71 LKAIGVDNPAAKVLVDMSKVQDDEVGDGTTSVTVLAAELLREAELLIAKKIHPQIIIAGWRKATQ 135

  Fly   129 KALEVL---------DQVKVPVEINKKNLVEVANTSLKTKVHPALADLLTDVCVNAVLTIASADK 184
            .|.:.|         |:||.     :::|:.::.|:|.:|:.....|....:.|.||:.:..:. 
Zfish   136 AARDALREAAVDHGSDEVKF-----QEDLLNISRTTLSSKLLTHHKDHFAKLAVQAVMRLRGSG- 194

  Fly   185 TKPVDLHMVELMEMQHKSDTDTQLVRGLVMDH--GARHPDMPKRLENAYILTANVSLEYEKAEVN 247
                :|..:.|::....|.||:.|..|.::|.  |.   :.|||:|||.||.||..::.:|.:: 
Zfish   195 ----NLEAIHLIKKLGGSLTDSYLDEGFLLDKRIGV---NQPKRIENANILIANTGMDTDKIKI- 251

  Fly   248 SGFFYKTAEEREAFV----RAEREFIDQRVKKVIELKRSV-CDGTDKTFVLINQKGIDPISLDAL 307
              |..:...:..|.|    .||:|.:.::|:::  ||..: |        .||::.|........
Zfish   252 --FGSRVRVDSTAKVAEIETAEKEKMKEKVERI--LKHGINC--------FINRQLIYNYPEQLF 304

  Fly   308 AKEGILALRRAKRRNMERLSLACGGTAMNSFDDLQEEHLGYAGVVYEHVLGENKYTFVEDCKNPL 372
            |..|::|:..|....:|||:|..||...::||..:...||:..::.|.::||:............
Zfish   305 AAAGVMAIEHADFTGVERLALVTGGEITSTFDHPELVKLGHCKLIEEVMIGEDTLIHFSGVSMGE 369

  Fly   373 SVTILIKGPNKHTITQIKDAIRDGLRAINNTIADKALVPGAGAFEVRAYNELVAFKDTIKGKSRL 437
            :.||:::|..:..:.:.:.::.|.|..:..|:.:...|.|.|..|:.....:....:...||..:
Zfish   370 ACTIVLRGATQQILDEAERSLHDALCVLAQTVKETRTVYGGGCSEMLMAKAVSDLANHTPGKEAV 434

  Fly   438 AVQAFADALLVIPKTLAVNSGYDAQDTIVKLTVEDRLSPELVGLDLATGEPMKPVDLGVYDNYIV 502
            |:::||.||:::|..:|.|:|||:.:.:.:|....:.:....|||:..|.......|||.:::.|
Zfish   435 AMESFAKALMMLPTIIADNAGYDSAELVSQLRAAHQDNKNTFGLDMTQGCVGDMSALGVTESFQV 499

  Fly   503 KKQILNSCSIIASNLLLVDEVMRA 526
            |:|:|.|.:..|..:|.||.:::|
Zfish   500 KRQVLLSAAEAAEMILRVDNIIKA 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT6NP_573066.1 chap_CCT_zeta 3..532 CDD:274088 144/542 (27%)
TCP1_zeta 7..528 CDD:239458 143/538 (27%)
cct2NP_958863.1 PTZ00212 7..530 CDD:185514 145/543 (27%)
TCP1_beta 11..527 CDD:239452 143/539 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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