DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT6 and cct7

DIOPT Version :9

Sequence 1:NP_573066.1 Gene:CCT6 / 32518 FlyBaseID:FBgn0027329 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_775355.1 Gene:cct7 / 192324 ZFINID:ZDB-GENE-020419-7 Length:547 Species:Danio rerio


Alignment Length:538 Identity:142/538 - (26%)
Similarity:259/538 - (48%) Gaps:22/538 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ISLLNPKAEFARAAQALAINISAAKGLQDVMRTNLGPKGTVKMLVSGAGDIKITKDGNVLLHEMQ 68
            :.||....:.::....|..||:|.:.:.:.:||.|||:|..|::|...|...|:.||..:|..:.
Zfish     6 VILLKEGTDTSQGVPQLVSNINACQVVAEAVRTTLGPRGMDKLVVDNRGKATISNDGATILKLLD 70

  Fly    69 IQHPTASMIARASTAQDDSTGDGTTTTVMLIGELLKQADIYLSEGLHPRIMTDGFEKARDKALEV 133
            :.||.|..:...:.:||...|||||:..:|..|.|||...|:.|||||:.:...|..|...|::.
Zfish    71 VVHPAAKTLVDIARSQDAEVGDGTTSVTLLAAEFLKQLKPYVEEGLHPQTIIRAFRIATQLAVKK 135

  Fly   134 LDQVKVPVEINKKN-----LVEVANTSLKTKVHPALADLLTDVCVNAVLTIASADKTKPVDLHMV 193
            :.::.|.::.:.|.     |.:.|.|:|.:|:.....|..:.:.|:||:.:   |...|  |.|:
Zfish   136 IKEIAVTIKKDDKQEQRRLLEKCAATALNSKLIAGQKDFFSKMVVDAVMML---DDLLP--LKMI 195

  Fly   194 ELMEMQHKSDTDTQLVRGLVMDHG---ARHPDMPKRLENAYILTANVSLEYEKAEVNSGFFYKTA 255
            .:.::|..:..::|||.|:.....   |.....|||..|..|...|:.||.:..:.|:.....:.
Zfish   196 GVKKVQGGALEESQLVAGVAFKKTFSYAGFEMQPKRYMNPKIALLNIELELKAEKDNAEVRVNSM 260

  Fly   256 EEREAFVRAEREFIDQRVKKVIELKRSVCDGTDKTFVLINQKGIDPISLDALAKEGILALRRAKR 320
            |:.:|.|.||...:..:::|:.:      .|..   |::::..|..::....|...:....|...
Zfish   261 EDYQAIVDAEWNILYDKLEKIHK------SGAK---VVLSKLPIGDVATQYFAYRNLFCAARVVE 316

  Fly   321 RNMERLSLACGGTAMNSFDDLQEEHLGYAGVVYEHVLGENKYTFVEDCKNPLSVTILIKGPNKHT 385
            .|::|..:||||:...|...|.::.||...:..|..:|..:|.|.:.|....:.||:::|..:..
Zfish   317 ENLKRTMMACGGSIQTSVGSLTDDVLGQCELFEEVQVGGERYNFFKGCPKAKTCTIILRGGAEQF 381

  Fly   386 ITQIKDAIRDGLRAINNTIADKALVPGAGAFEVRAYNELVAFKDTIKGKSRLAVQAFADALLVIP 450
            :.:...::.|.:..:...|.:.::|.|.||.|:.....|..:..||.||.:|.:.|:|.||.:||
Zfish   382 MEETDRSLHDAIMIVRRAIKNDSIVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIP 446

  Fly   451 KTLAVNSGYDAQDTIVKLTVEDRLSPELVGLDLATGEPMKPVDLGVYDNYIVKKQILNSCSIIAS 515
            :.|..|:|:||.:.:.||..:........|:|:...:........|::..||:...|.:.|..|.
Zfish   447 RQLCDNAGFDATNILNKLRAKHAQGGMWYGVDVNNEDIADNFQACVWEPSIVRINALTAASEAAC 511

  Fly   516 NLLLVDEVMRAGMTSLKG 533
            .:|.|||.::...:|:.|
Zfish   512 LILSVDETIKNPRSSVDG 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT6NP_573066.1 chap_CCT_zeta 3..532 CDD:274088 141/535 (26%)
TCP1_zeta 7..528 CDD:239458 139/528 (26%)
cct7NP_775355.1 chap_CCT_eta 4..525 CDD:274086 140/532 (26%)
TCP1_eta 5..525 CDD:239456 140/532 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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