DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT6 and cct-8

DIOPT Version :9

Sequence 1:NP_573066.1 Gene:CCT6 / 32518 FlyBaseID:FBgn0027329 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_500035.3 Gene:cct-8 / 176928 WormBaseID:WBGene00021934 Length:548 Species:Caenorhabditis elegans


Alignment Length:519 Identity:135/519 - (26%)
Similarity:233/519 - (44%) Gaps:23/519 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 FARAAQALAINISAAKGLQDVMRTNLGPKGTVKMLVSGAGDIKITKDGNVLLHEMQIQHPTASMI 77
            |....:|:..||.|...|...:|:..||.|..||:::....:.:|.|...:|.|::||||.|.:|
 Worm    21 FKGTDEAVQRNIEACTELASQIRSAYGPNGMNKMVINHIEKLFVTNDAATILKELEIQHPAARII 85

  Fly    78 ARASTAQDDSTGDGTTTTVMLIGELLKQADIYLSEGLHPRIMTDGFEKARDKALEVLDQVKVPVE 142
            ..|:..|:...||.|.|.|:|...||:.|...:..|:.|:.:..|:|:|.:||||:|..:.|...
 Worm    86 IMATEMQEKQIGDNTNTVVILAAALLEHAANLIHMGMTPQEVAAGYEQAAEKALEILPTLVVKEA 150

  Fly   143 INKKNLVEV------ANTSLKTKVHPALADLLTDVCVNAVLTIASADKTKPVDLHMVELMEMQHK 201
            .:.||:.||      |.||.:......:|||:...||    |...|:... .::..:.:.::...
 Worm   151 TDMKNIEEVRQYIRSAITSKQYDNEDIIADLVAKACV----TTCPANSFN-FNVDNIRICKIIGS 210

  Fly   202 SDTDTQLVRGLVMDHGARHPDMPKRLENAYILTANVSLEYEKAEVNSGFFYKTAEEREAFVRAER 266
            ....:.::.|:|...||.......|  :|.|.......:..:.|.......:.|:|...|.:.|.
 Worm   211 GVHTSTVMNGMVFKRGAEGEIREAR--DARIAVYTCPFDLTQTETKGTVLIENADELRNFSKGEE 273

  Fly   267 EFIDQRVKKVIELKRSVCDGTDKTFVLINQKGIDPISLDALAKEGILALRRAKRRNMERLSLACG 331
            ..::::||       ::.|...|..|...:.|  .:.|..|.|..|:|:|...:.::.||....|
 Worm   274 AEVEEQVK-------AIADNGVKVVVAAGKFG--DMYLHFLNKYKIMAVRLTSKFDLRRLCRTVG 329

  Fly   332 GTAMNSFDDLQEEHLGYA-GVVYEHVLGENKYTFVEDCKNPLSVTILIKGPNKHTITQIKDAIRD 395
            ..............||:. .|..:.:..||...|.:..:.....||:|:|.::..|..::.|:.|
 Worm   330 AQPQARICAPAVNLLGHCDSVAVQEIGDENVVVFDKKSETGKVATIIIRGSSQSRIDDVERAVDD 394

  Fly   396 GLRAINNTIADKALVPGAGAFEVRAYNELVAFKDTIKGKSRLAVQAFADALLVIPKTLAVNSGYD 460
            .:........|..|:.||||.|:....|:.:|.....|..:.|::.||.||..:||.:|.|:|..
 Worm   395 AVNTYKALTKDGKLLAGAGAVEIELAKEIESFGAKAPGLEQYAIKKFAHALETLPKAIAENAGMP 459

  Fly   461 AQDTIVKLTVEDRLSPELVGLDLATGEPMKPVDLGVYDNYIVKKQILNSCSIIASNLLLVDEVM 524
            ..:|:.||..|.....:..|:|:...|.|..|...::|.|..|:..:...:..||.:|.||:::
 Worm   460 TTETLTKLYAEHVAGKKNAGIDIWKRETMDAVVNNIFDLYAGKRLAIKLATDAASTILKVDQII 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT6NP_573066.1 chap_CCT_zeta 3..532 CDD:274088 135/519 (26%)
TCP1_zeta 7..528 CDD:239458 135/519 (26%)
cct-8NP_500035.3 TCP1_theta 19..526 CDD:239457 135/519 (26%)
Cpn60_TCP1 38..526 CDD:278544 130/502 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D207515at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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