DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT6 and cct-5

DIOPT Version :9

Sequence 1:NP_573066.1 Gene:CCT6 / 32518 FlyBaseID:FBgn0027329 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_741117.1 Gene:cct-5 / 175588 WormBaseID:WBGene00000380 Length:542 Species:Caenorhabditis elegans


Alignment Length:513 Identity:168/513 - (32%)
Similarity:267/513 - (52%) Gaps:20/513 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 QALAINISAAKGLQDVMRTNLGPKGTVKMLVSGAGDIKITKDGNVLLHEMQIQHPTASMIARAST 82
            :|:..:|.||:.:.:.:||:|||:|..|||||..||:.||.||..::.:|.:||..|.::...|.
 Worm    33 EAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLMVELSK 97

  Fly    83 AQDDSTGDGTTTTVMLIGELLKQADIYLSEGLHPRIMTDGFEKARDKALEVLDQV--KVPVEINK 145
            :||...|||||..|:|.|.||::|:..:..|:||..:.|||:.|..||||.||.:  |.||| |:
 Worm    98 SQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSISDKFPVE-NR 161

  Fly   146 KNLVEVANTSLKTKVHPALADLLTDVCVNAVLTIASADKTKPVDLHMVELMEMQHKSDTDTQLVR 210
            :.|||.|.|||.:|:.........::.|:|||::|..: :|.|:..|:::.........||.||:
 Worm   162 ERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSVADIE-SKDVNFEMIKMEGKVGGRLEDTILVK 225

  Fly   211 GLVMDHGARHPDMPKRLENAYILTANVSLEYEKAEVNSGFFYKTAEEREAFVRAEREFIDQRVKK 275
            |:|:|....||.|||.|:||.:.......|..|.:........:.|:.:|....|||..:..:::
 Worm   226 GIVIDKTMSHPQMPKELKNAKVAILTCPFEPPKPKTKHKLDITSTEDFKALRDYERETFETMIRQ 290

  Fly   276 VIELKRSVCDGTDKTFVLINQKGIDPISLDALAKEGILALRRAKRRNMERLSLACGGTAMNSFDD 340
            |.|...::.         |.|.|.|..:...|....:.|:|......:|.|::|.....:..|.:
 Worm   291 VKESGATLA---------ICQWGFDDEANHLLQANDLPAVRWVGGPEIELLAIATNARIVPRFSE 346

  Fly   341 LQEEHLGYAGVVYEHVLG--ENKYTFVEDCKNPLSVTILIKGPNKHTITQIKDAIRDGLRAINNT 403
            |.:|.||.||:|.|...|  :::...:|.|.|..:|||.::|.||..|.:.|.|:.|.|..|.|.
 Worm   347 LSKEKLGTAGLVREITFGAAKDRMLSIEQCPNNKAVTIFVRGGNKMIIDEAKRALHDALCVIRNL 411

  Fly   404 IADKALVPGAGAFEVRAYNELVAFKDTIKGKSRLAVQAFADALLVIPKTLAVNSGYDAQDTIVKL 468
            :.|..:|.|.|:.|:.|..::....|.|.|..:.|.:||||||..||..||.|||....|.:..|
 Worm   412 VRDSRIVYGGGSAELAAAIQVAKEADRIDGIEQYAFRAFADALESIPMALAENSGLAPIDALSDL 476

  Fly   469 TVED-RLSPELVGLD--LATGEPMKPVDLGVYDNYIVKKQILNSCSIIASNLLLVDEV 523
            ..:. ......:|:|  .|....||  :..|.:..:.|::.::..:.:...:|.:|:|
 Worm   477 KAKQIETGKSSLGIDAVFAGTNDMK--EQKVIETLLSKREQISLATQVVRMILKIDDV 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT6NP_573066.1 chap_CCT_zeta 3..532 CDD:274088 168/513 (33%)
TCP1_zeta 7..528 CDD:239458 168/513 (33%)
cct-5NP_741117.1 TCP1_epsilon 11..534 CDD:239455 168/513 (33%)
Cpn60_TCP1 45..532 CDD:278544 163/499 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D207515at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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