DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCT6 and cct-1

DIOPT Version :9

Sequence 1:NP_573066.1 Gene:CCT6 / 32518 FlyBaseID:FBgn0027329 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_495722.1 Gene:cct-1 / 174318 WormBaseID:WBGene00000377 Length:549 Species:Caenorhabditis elegans


Alignment Length:520 Identity:136/520 - (26%)
Similarity:269/520 - (51%) Gaps:26/520 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 NISAAKGLQDVMRTNLGPKGTVKMLVSGAGDIKITKDGNVLLHEMQIQHPTASMIARASTAQDDS 87
            |::||..:.::::::|||.|..||||...||:.:|.||..:|.:::::||...::...:..||:.
 Worm    25 NVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHPAGKVLVELAQLQDEE 89

  Fly    88 TGDGTTTTVMLIGELLKQADIYLSEGLHPRIMTDGFEKARDKALE-VLDQVKVPVE-INKKNLVE 150
            .|||||:.|::..||||:||..:.:.:||..:.:|:..|..:|:: :.:.:....: |.::::|.
 Worm    90 VGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKYISENISFTSDSIGRQSVVN 154

  Fly   151 VANTSLKTKVHPALADLLTDVCVNAVLTIASADKTK-PVDLHMVELMEMQHKSDTDTQLVRGLVM 214
            .|.||:.:|:....||...::.|:|...:...:..| ...::.|.:::...||..::.||:|..:
 Worm   155 AAKTSMSSKIIGPDADFFGELVVDAAEAVRVENNGKVTYPINAVNVLKAHGKSARESVLVKGYAL 219

  Fly   215 DHGARHPDMPKRLENAYILTANVSLEYEKAEVNSGFFYKTAEEREAFVRAEREFIDQRVKKVIEL 279
            :.......||.|::||.|...:.||...|..:......:...:.||..|.|.:...:|:.|:::.
 Worm   220 NCTVASQAMPLRVQNAKIACLDFSLMKAKMHLGISVVVEDPAKLEAIRREEFDITKRRIDKILKA 284

  Fly   280 KRSVCDGTDKTFVLINQKGIDPISLDALAKEGILALRRAKRRNMERLSLACGGTAMNSFDDLQEE 344
            ..:         |::...|||.:.|....:.|.:|:||.|:.:::|::.|.|.|...|...|:.:
 Worm   285 GAN---------VVLTTGGIDDLCLKQFVESGAMAVRRCKKSDLKRIAKATGATLTVSLATLEGD 340

  Fly   345 H------LGYAGVVYEHVLGENKYTFVEDCKNPLSVTILIKGPNKHTITQIKDAIRDGLRAINNT 403
            .      ||:|..:.:..:.:::...::..|:..:.:|:::|.|...:.:::.::.|.|..:...
 Worm   341 EAFDASLLGHADEIVQERISDDELILIKGPKSRTASSIILRGANDVMLDEMERSVHDSLCVVRRV 405

  Fly   404 IADKALVPGAGAFEVRAYNELVAFKDTIKGKSRLAVQAFADALLVIPKTLAVNSGYDAQDTIVKL 468
            :..|.||.|.||.|......|..:..|:..:.:|||..||.|||:|||.||.|:..|:.|.:.||
 Worm   406 LESKKLVAGGGAVETSLSLFLETYAQTLSSREQLAVAEFASALLIIPKVLASNAARDSTDLVTKL 470

  Fly   469 TV---EDRLSPEL-----VGLDLATGEPMKPVDLGVYDNYIVKKQILNSCSIIASNLLLVDEVMR 525
            ..   :.:|.|:|     .||||..|......:.|:.:..:.|.:.|...:..|..:|.:|::::
 Worm   471 RAYHSKAQLIPQLQHLKWAGLDLEEGTIRDNKEAGILEPALSKVKSLKFATEAAITILRIDDLIK 535

  Fly   526  525
             Worm   536  535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT6NP_573066.1 chap_CCT_zeta 3..532 CDD:274088 136/520 (26%)
TCP1_zeta 7..528 CDD:239458 136/520 (26%)
cct-1NP_495722.1 chap_CCT_alpha 9..543 CDD:274081 136/520 (26%)
TCP1_alpha 13..538 CDD:239451 136/520 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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