DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT6 and Cct3

DIOPT Version :9

Sequence 1:NP_573066.1 Gene:CCT6 / 32518 FlyBaseID:FBgn0027329 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_033966.1 Gene:Cct3 / 12462 MGIID:104708 Length:545 Species:Mus musculus


Alignment Length:522 Identity:157/522 - (30%)
Similarity:285/522 - (54%) Gaps:16/522 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 NPKAEFARAAQALAINISAAKGLQDVMRTNLGPKGTVKMLVSGAGDIKITKDGNVLLHEMQIQHP 72
            |.|.|..|..|  :.||:|||.:.|::||.||||..:|||:...|.|.:|.|||.:|.|:|:|||
Mouse    13 NTKRESGRKVQ--SGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHP 75

  Fly    73 TASMIARASTAQDDSTGDGTTTTVMLIGELLKQADIYLSEGLHPRIMTDGFEKARDKALEVLDQV 137
            .|..:...|..||:..|||||:.::|.||:|..|:.:|.:.:||.::...:..|.|..:..|.::
Mouse    76 AAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRMALDDMISTLKKI 140

  Fly   138 KVPVEINKKN-LVEVANTSLKTKVHPALADLLTDVCVNAVLTIASADK-TKPVDLHMVELME-MQ 199
            ..||::|.:. ::.:.|:|:.|||....:.|..::.::||.|:...:. .|.:|:.....:| :.
Mouse   141 STPVDVNNREMMLSIINSSITTKVISRWSSLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIP 205

  Fly   200 HKSDTDTQLVRGLVMDHGARHPDMPKRLENAYILTANVSLEYEKAEVNSGFFYKTAEEREAFVRA 264
            .....|:.::||::::....||.|.:.::|..|:..:.||||:|.|..:.......|:....::.
Mouse   206 GGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQM 270

  Fly   265 EREFIDQRVKKVIELKRSVCDGTDKTFVLINQKGIDPISLDALAKEGILALRRAKRRNMERLSLA 329
            |.|:|.|..:.:|:||..         |:|.:|||..::...|.:..:.|:||.::.:..|::.|
Mouse   271 EEEYIHQLCEDIIQLKPD---------VVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARA 326

  Fly   330 CGGTAMNSFDDLQEEHLGY-AGVVYEHVLGENKYTFVEDCKNPLSVTILIKGPNKHTITQIKDAI 393
            ||...::..::|:|:.:|. ||::....:|:..:||:.|||:|.:.|||::|.:|..:::::..:
Mouse   327 CGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCKDPKACTILLRGASKEILSEVERNL 391

  Fly   394 RDGLRAINNTIADKALVPGAGAFEVRAYNELVAFKDTIKGKSRLAVQAFADALLVIPKTLAVNSG 458
            :|.::...|.:.|..||||.||.|:...:.|......:.|..:...:|.|.||.|||:||..|.|
Mouse   392 QDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCG 456

  Fly   459 YDAQDTIVKLTVE-DRLSPELVGLDLATGEPMKPVDLGVYDNYIVKKQILNSCSIIASNLLLVDE 522
            ......:..|..: .:.|.|..|::..||..:...:||:::...||.|...:....|..||.:|:
Mouse   457 ASTIRLLTSLRAKHTQESCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDD 521

  Fly   523 VM 524
            ::
Mouse   522 IV 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT6NP_573066.1 chap_CCT_zeta 3..532 CDD:274088 157/522 (30%)
TCP1_zeta 7..528 CDD:239458 157/522 (30%)
Cct3NP_033966.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24 5/12 (42%)
chap_CCT_gamma 6..529 CDD:274085 157/522 (30%)
TCP1_gamma 6..525 CDD:239453 157/522 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 526..545
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.