DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8944 and sens

DIOPT Version :9

Sequence 1:NP_573065.1 Gene:CG8944 / 32517 FlyBaseID:FBgn0030680 Length:762 Species:Drosophila melanogaster
Sequence 2:NP_524818.1 Gene:sens / 45328 FlyBaseID:FBgn0002573 Length:541 Species:Drosophila melanogaster


Alignment Length:478 Identity:94/478 - (19%)
Similarity:163/478 - (34%) Gaps:127/478 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   299 NISLAKDAITRKWDNLRTVYKRECNRMALEKTNISTLWYFKELHFLNEVYSYN---------DKM 354
            |:| .|:.||.. |:.|..|....|..:...::       .|:..|:.:.|.|         :..
  Fly   138 NLS-TKERITSD-DSNRDQYHSSSNNSSRSSSS-------SEVEQLHPMTSLNVTPPPLSAVNLK 193

  Fly   355 SDAVVKETSYRRRFSAIWNDTSTAKL--------LSMVKRYQCFYNRFDPDYR--SKERRGEGLH 409
            |.:..::...|.:.:.||:..|..:.        |.|.::.....::.||..|  ..|||...:.
  Fly   194 SSSTPQQQRQRSQGNIIWSPASMCERSARREQYGLKMEEQGDEEEHQVDPIVRKFKYERRTASIS 258

  Fly   410 QMAIELQQLIDVTTIQISKRISQLRFDYSKQKMERLNSERLGKKFIANYLYYDQMHFMDDDIPPF 474
                .||..|...:...|..:..|.|:.::|:                 ||              
  Fly   259 ----SLQSPISSLSAPASNAVQDLEFEVAQQQ-----------------LY-------------- 288

  Fly   475 KCAHCPEIVQTLRELDLHMLT-------HQPSLGGGYYCNICSIQFHNAQEFDNHKQLHLGGVTE 532
              ||....:..|...:|.:||       .||......:      :..:.|:.||.....|..:  
  Fly   289 --AHRSAFMAGLTGNNLELLTQHLKLKSEQPQQQQQQH------RIKDEQQQDNRSAAALMNL-- 343

  Fly   533 IKFNCELCTASFREKANYDEHLRRHNEELFLPSLALNHSIMEGGLGDDEIGVEGEESRGSGSRRK 597
                  :..|.|....|..:..::..::      .|:|                 :.:....:.:
  Fly   344 ------VAAAEFGYMRNQHQQPQQQQQQ------QLHH-----------------QQQPQQHQHQ 379

  Fly   598 RRHA-AKATDDMVDDDDRIGGGGGGGSGGGGTDIAKPYG----CDVCRRSFATPGHLNAHRIVHQ 657
            ::|. :.|||        :.......|...|.:..|..|    |..|.:||.....|:.|.::|.
  Fly   380 QQHPDSTATD--------VARRSSSSSSYQGENEEKRSGRNFQCKQCGKSFKRSSTLSTHLLIHS 436

  Fly   658 DERERCYKCDYPQCNKSFVARNSLFEHLKQHYSNEEFKCDICGKTFKSTKNLQNHKQIHDKIKRY 722
            |.|.  |.|.|  |.|.|..::.:.:|...|...:..||.:|.|.|..:.||..|.:.|...|.:
  Fly   437 DTRP--YPCQY--CGKRFHQKSDMKKHTYIHTGEKPHKCTVCLKAFSQSSNLITHMRKHTGYKPF 497

  Fly   723 VCQICGSAFAQAAGLYLHKR-RH 744
            .|.:|..:|.:...|..|:. ||
  Fly   498 GCHLCDQSFQRKVDLRRHRESRH 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8944NP_573065.1 MADF_DNA_bdg 259..344 CDD:287510 10/44 (23%)
MADF 379..472 CDD:214738 17/102 (17%)
C2H2 Zn finger 476..496 CDD:275368 6/26 (23%)
C2H2 Zn finger 506..526 CDD:275368 3/19 (16%)
C2H2 Zn finger 537..557 CDD:275368 3/19 (16%)
C2H2 Zn finger 636..656 CDD:275368 6/19 (32%)
zf-C2H2_8 639..712 CDD:292531 23/72 (32%)
C2H2 Zn finger 666..688 CDD:275368 6/21 (29%)
zf-C2H2 694..716 CDD:278523 8/21 (38%)
C2H2 Zn finger 696..716 CDD:275368 7/19 (37%)
zf-H2C2_2 708..733 CDD:290200 8/24 (33%)
C2H2 Zn finger 724..744 CDD:275368 5/20 (25%)
sensNP_524818.1 zf-C2H2 413..435 CDD:278523 6/21 (29%)
C2H2 Zn finger 415..435 CDD:275368 6/19 (32%)
COG5048 423..>497 CDD:227381 23/77 (30%)
zf-H2C2_2 428..452 CDD:290200 11/27 (41%)
C2H2 Zn finger 443..463 CDD:275368 6/21 (29%)
zf-H2C2_2 455..480 CDD:290200 7/24 (29%)
C2H2 Zn finger 471..491 CDD:275368 7/19 (37%)
C2H2 Zn finger 499..516 CDD:275368 4/16 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24390
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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