DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8944 and CG4730

DIOPT Version :10

Sequence 1:NP_573065.1 Gene:CG8944 / 32517 FlyBaseID:FBgn0030680 Length:762 Species:Drosophila melanogaster
Sequence 2:NP_651413.1 Gene:CG4730 / 43099 FlyBaseID:FBgn0039355 Length:392 Species:Drosophila melanogaster


Alignment Length:307 Identity:61/307 - (19%)
Similarity:118/307 - (38%) Gaps:65/307 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   481 EIVQTLR--------ELDLHMLTHQPSLGG-------GYYCNIC--------------------S 510
            ::.|||.        |..:.:::|:.||..       ...|.:|                    :
  Fly     7 KVCQTLNFTIARRTAEAPVKLVSHEVSLSDSTTSLELSNCCRLCLEEPYPNQMLDMTVIYDQEAA 71

  Fly   511 IQFHNAQEFDNHKQLHLGGVTEIKFNCELCTASFREKANYDEHLR-----RHNEELFLPSLALNH 570
            :.:::..|....:.|......|.:..|:.|....  |..||.|.:     :...|:|:.:.|  :
  Fly    72 LSYYDCYEICTKEDLRQNPKNEPRTLCKRCAVEL--KWAYDFHKKMAIANQQLREIFVATEA--N 132

  Fly   571 SIMEGGLGDDEIGVE-GEESRGSGSRRKRRHAAKATDDMVDDDDRIGGGGGGGSGGGGTDIAKPY 634
            :..|..:.|:|...: .||........|:.....:.:|:|..:...|..                
  Fly   133 TEQEDDVEDEENEADMNEEFLMEEIEEKQETPIDSLEDIVPRNRHTGKS---------------- 181

  Fly   635 GCDVCRRSFATPGHLNAHRIVHQDERERCYKCDYPQCNKSFVARNSLFEHLKQHYSNEEFKCDIC 699
            .|..|.:.|.....:..|:::|...|.. ::|.  ||::.::.:.:|..|:...:......||.|
  Fly   182 NCKFCHKEFRNHSRMAKHQMIHLANRPN-FRCS--QCDRVYLTKQALKVHVDSKHRQSGVHCDTC 243

  Fly   700 GKTFKSTKNLQNHKQIHDKIKRYVCQICGSAFAQAAGLYLHKR-RHN 745
            ||.|...|.|:.||:.|::...|.|.:|...|||.:.|.:|:: :|:
  Fly   244 GKVFAIAKALEIHKRYHNRDFPYSCDLCDRRFAQRSHLTVHQQVKHS 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8944NP_573065.1 MADF_DNA_bdg 259..344 CDD:463144
MADF 379..472 CDD:214738
C2H2 Zn finger 476..496 CDD:275368 4/22 (18%)
C2H2 Zn finger 506..526 CDD:275368 3/39 (8%)
C2H2 Zn finger 537..557 CDD:275368 6/24 (25%)
C2H2 Zn finger 636..656 CDD:275368 4/19 (21%)
COG5048 <666..734 CDD:227381 21/67 (31%)
C2H2 Zn finger 666..688 CDD:275368 5/21 (24%)
C2H2 Zn finger 696..716 CDD:275368 10/19 (53%)
C2H2 Zn finger 724..744 CDD:275368 7/20 (35%)
CG4730NP_651413.1 zf-AD 46..124 CDD:462262 11/79 (14%)
C2H2 Zn finger 183..203 CDD:275368 4/19 (21%)
C2H2 Zn finger 212..232 CDD:275368 5/21 (24%)
C2H2 Zn finger 240..260 CDD:275368 10/19 (53%)
C2H2 Zn finger 268..289 CDD:275368 7/20 (35%)
C2H2 Zn finger 296..318 CDD:275368
C2H2 Zn finger 325..346 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.