DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8944 and su(Hw)

DIOPT Version :9

Sequence 1:NP_573065.1 Gene:CG8944 / 32517 FlyBaseID:FBgn0030680 Length:762 Species:Drosophila melanogaster
Sequence 2:NP_001247098.1 Gene:su(Hw) / 41740 FlyBaseID:FBgn0003567 Length:941 Species:Drosophila melanogaster


Alignment Length:690 Identity:131/690 - (18%)
Similarity:209/690 - (30%) Gaps:268/690 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 TDADTALLEPQMVIKQE---LQDLPCSDDDVVAGE-EDDDEQRLNDSEADEDEAILPESDVPVVS 159
            |.|||.:    .|:.:|   :..:...|::||.|. |:::.|.:..:|.|||             
  Fly   144 TKADTTV----TVVTEEDDTIDFILADDEEVVPGRIENNNGQEIVVTEDDED------------- 191

  Fly   160 SKTRARKKVTKQRQRDMSSELLIAGDGDSSMDDYGDPDHSYMDDNSGEYMDFAGFDGVNHSGFGT 224
                                  :..|||.                          ||.:.||.|.
  Fly   192 ----------------------LGEDGDE--------------------------DGEDSSGKGN 208

  Fly   225 ESDFLSYDEMVEESLLGRDREVTMHIKDRKMIQFLIHSYQRNPFLWDHGNAQFRDRVKRARFLDW 289
            .|.             .:.:|:..|:..:     ...:::|...|..|                 
  Fly   209 SSQ-------------TKIKEIVEHVCGK-----CYKTFRRVQSLKKH----------------- 238

  Fly   290 IVLEF---KSRFNISLAKDAITRKWDNLRTVYKRECNRMALEKTNI----STLWYFKELHFLNEV 347
              |||   .|.:::        ||.|.|:.:.|.|.:.:.:||.:|    |..:....|..:|  
  Fly   239 --LEFCRYDSGYHL--------RKADMLKNLEKIEKDAVVMEKKDICFCCSESYDTFHLGHIN-- 291

  Fly   348 YSYNDKMSDAVVKETSYRRRFSAIWNDTSTAKLLSMVKRYQCFYNRFDPDYRSKERRGEGLHQMA 412
               ......:...:|||.|......::                ::.|.....:...|.|.|  :|
  Fly   292 ---CPDCPKSFKTQTSYERHIFITHSE----------------FSDFPCSICNANLRSEAL--LA 335

  Fly   413 IELQQLIDVTTIQISKRISQLRFDYSKQKMERLNSERLGKKFIANYLYYDQMHF---MDDDIPPF 474
            :..:|                    .|.:.:....:..||.|..:|.......:   ..::....
  Fly   336 LHEEQ--------------------HKSRGKPYACKICGKDFTRSYHLKRHQKYSSCSSNETDTM 380

  Fly   475 KCAHCPEIVQTLRELDLHMLTH-------QPSLGGGYYCNICSIQFHNAQEFDNHKQLHLGGVTE 532
            .|..|..:...|..|..|:..|       :|.    |.|:.|...|::....:.|.:.|.|   |
  Fly   381 SCKVCDRVFYRLDNLRSHLKQHLGTQVVKKPE----YMCHTCKNCFYSLSTLNIHIRTHTG---E 438

  Fly   533 IKFNCELCTASFREKANYDEHLRRHNEELFLPSLALNHSIMEGGLGDDEIGVEGEESRGSGSRRK 597
            ..|:|:||...|.......:|.|.|..|                                     
  Fly   439 KPFDCDLCDKKFSALVALKKHRRYHTGE------------------------------------- 466

  Fly   598 RRHAAKATDDMVDDDDRIGGGGGGGSGGGGTDIAKPYGCDVCRRSFATPGHLNAHRIVHQDERER 662
                                              |||.|.||.::||....||.|...|..||. 
  Fly   467 ----------------------------------KPYSCTVCNQAFAVKEVLNRHMKRHTGERP- 496

  Fly   663 CYKCDYPQCNKSFVARNSLFEHLKQHYSNEEFKCDICGKTFKSTKNLQNHKQIHDKIKR--YVCQ 725
             :|||  :|.|||:....|..|.|.|.  ..|.|:.|.:.||:.|.|:.|.:.|.:.||  :.|.
  Fly   497 -HKCD--ECGKSFIQATQLRTHSKTHI--RPFPCEQCDEKFKTEKQLERHVKTHSRTKRPVFSCA 556

  Fly   726 ICGSAFAQAAGLYLH--------KRRHNRPNGAVGAVGRS 757
            .|...|...|.|..|        |::.:....||..:.|:
  Fly   557 ECKRNFRTPALLKEHMDEGKHSPKQQRSSMRSAVKIMERT 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8944NP_573065.1 MADF_DNA_bdg 259..344 CDD:287510 18/91 (20%)
MADF 379..472 CDD:214738 11/95 (12%)
C2H2 Zn finger 476..496 CDD:275368 5/19 (26%)
C2H2 Zn finger 506..526 CDD:275368 4/19 (21%)
C2H2 Zn finger 537..557 CDD:275368 6/19 (32%)
C2H2 Zn finger 636..656 CDD:275368 8/19 (42%)
zf-C2H2_8 639..712 CDD:292531 27/72 (38%)
C2H2 Zn finger 666..688 CDD:275368 9/21 (43%)
zf-C2H2 694..716 CDD:278523 8/21 (38%)
C2H2 Zn finger 696..716 CDD:275368 7/19 (37%)
zf-H2C2_2 708..733 CDD:290200 8/26 (31%)
C2H2 Zn finger 724..744 CDD:275368 7/27 (26%)
su(Hw)NP_001247098.1 C2H2 Zn finger 292..313 CDD:275368 4/20 (20%)
COG5048 <312..517 CDD:227381 58/324 (18%)
C2H2 Zn finger 321..341 CDD:275368 5/41 (12%)
zf-C2H2 348..368 CDD:278523 4/19 (21%)
C2H2 Zn finger 350..368 CDD:275368 4/17 (24%)
C2H2 Zn finger 382..402 CDD:275368 5/19 (26%)
C2H2 Zn finger 415..435 CDD:275368 4/19 (21%)
zf-H2C2_2 428..451 CDD:290200 8/25 (32%)
C2H2 Zn finger 443..463 CDD:275368 6/19 (32%)
zf-H2C2_2 455..479 CDD:290200 10/94 (11%)
COG5048 <467..620 CDD:227381 46/136 (34%)
C2H2 Zn finger 471..491 CDD:275368 8/19 (42%)
zf-H2C2_2 484..508 CDD:290200 13/27 (48%)
C2H2 Zn finger 499..519 CDD:275368 9/21 (43%)
C2H2 Zn finger 525..545 CDD:275368 7/19 (37%)
C2H2 Zn finger 555..572 CDD:275368 5/16 (31%)
C2H2 Zn finger 598..615 CDD:275371
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24390
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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