DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8944 and CG10654

DIOPT Version :10

Sequence 1:NP_573065.1 Gene:CG8944 / 32517 FlyBaseID:FBgn0030680 Length:762 Species:Drosophila melanogaster
Sequence 2:NP_001261767.1 Gene:CG10654 / 39428 FlyBaseID:FBgn0036294 Length:412 Species:Drosophila melanogaster


Alignment Length:323 Identity:70/323 - (21%)
Similarity:119/323 - (36%) Gaps:92/323 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   470 DIPP---FK--CAHCPEIVQTLREL---------DLHMLTHQPSLGGGYYCNICSIQFHNAQEFD 520
            |:||   .|  |..|.::||...:.         :...|.....:|    |:  .::.|...:.|
  Fly    77 DLPPQLVLKSICECCYQLVQKFHDFQRMCAESLRNFEKLLQDIDIG----CH--KLEDHTWHDLD 135

  Fly   521 NHKQLHLGGVTEIKFNCELCTASFREKANYDEHLRRHNEELFLPSLALNHSIMEGGLGDDEIGVE 585
            ...:.:.....|.:.:.. |.|:.:|..::..      .::.||...:...|..|...::|:.|.
  Fly   136 TPSESNESTNPEAQSHAP-CIAATQEIVSFIW------PQVCLPLAVILSRITLGASLEEEVYVI 193

  Fly   586 GEESR----------------GSGSRRKRRHAAKATDDMVDDDDRIGGGGGGGSGGGGTDIAKPY 634
            .:||.                |:..||..||..:                               
  Fly   194 EDESAKQDLGQEKLSISSKLLGARKRRGVRHTLE------------------------------- 227

  Fly   635 GCDVCRRSFATPGHLNAHRIVHQDERERCYKCDYPQCNKSFVARNSLFEHLKQHYSNEE-----F 694
             |.:|.|.|..|..|.||  :.|.|..|.|.|.:  |.||:...|.|..||:|.::|.:     :
  Fly   228 -CRICHRGFYKPSLLEAH--MQQHEGLRPYTCVH--CAKSYARANLLESHLRQMHNNADAARIIY 287

  Fly   695 KCDICGKTFKSTKNLQNH-KQIHDKI-------KRYVCQICGSAFAQAAGLYLHKRRHNRPNG 749
            .|..|.|.:.:.::|:.| ::.|::.       .|::|:.||..||:.|.|..||..|....|
  Fly   288 ACPSCNKVYTANRSLKYHMRRTHERYHESESPDARHICEECGKCFARKAHLTRHKMVHGSVEG 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8944NP_573065.1 MADF_DNA_bdg 259..344 CDD:463144
MADF 379..472 CDD:214738 1/1 (100%)
C2H2 Zn finger 476..496 CDD:275368 5/28 (18%)
C2H2 Zn finger 506..526 CDD:275368 3/19 (16%)
C2H2 Zn finger 537..557 CDD:275368 3/19 (16%)
C2H2 Zn finger 636..656 CDD:275368 8/19 (42%)
COG5048 <666..734 CDD:227381 22/80 (28%)
C2H2 Zn finger 666..688 CDD:275368 8/21 (38%)
C2H2 Zn finger 696..716 CDD:275368 5/20 (25%)
C2H2 Zn finger 724..744 CDD:275368 9/19 (47%)
CG10654NP_001261767.1 zf-AD 39..115 CDD:462262 8/37 (22%)
C2H2 Zn finger 228..248 CDD:275368 8/21 (38%)
SFP1 <243..310 CDD:227516 21/70 (30%)
C2H2 Zn finger 256..313 CDD:275368 16/58 (28%)
SFP1 <287..376 CDD:227516 18/64 (28%)
C2H2 Zn finger 289..314 CDD:275368 6/24 (25%)
C2H2 Zn finger 325..345 CDD:275368 9/19 (47%)
C2H2 Zn finger 355..376 CDD:275368
C2H2 Zn finger 385..405 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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